PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA02101.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

C2H2

Protein Properties

Length: 528aa MW: 59326.7 Da PI: 4.7416

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA02101.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.5	0.00096	213	236	1	20
EEET....TTTEEESSHHHHHHHH CS zf-C2H2 1 ykCp....dCgksFsrksnLkrHi 20 ++C+ +Cgk+F++ +L++H OVA02101.1 213 FVCGvigrKCGKRFKSCVSLVHHS 236 78999999***************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 528 aa Download sequence
MDPRRGAFSS ASFSEQSRID EVRYLHSLWH QGPPRNPNPN PNNVNNNNYI NLRPCNPPIF 60 KKNKKNNNRR SRKRDNRNEE EEEEESSQLV EPVSEHEWPT EPIPEPRNEF AWPDSVPQPD 120 LTSTRVLSEE EQEKFKGIQS QNKALKASQR FLTRNFGSDS EGEVDEDEDF MEDNDGDGEE 180 SEEFKFFFNL FTEDIELRNY YEKNWEGGDF PCFVCGVIGR KCGKRFKSCV SLVHHSNSIS 240 STNQRKAHRA FGQVLCRVLG WEFNRLPTIV LSASGPLSRT LAQASSSQVA NVESGNKVVD 300 TVNADIAGGD QREELNGIAV TYVGDVNGNS ADCENGIKKH DANDQQKEEL NDIAVNSAVN 360 GDGNSADCEA GTKANDANDQ QKALDKEVVD TMGANSGEPT DFNVNSRKDG VAQQDQDFQK 420 ETVNSVGEVN EELYEVYRRA SGTAQNLRRE RERAGRREGE AEIEREVERA GRERGGQGRR 480 RDGGNKVVLI AYVKDKFAPR PELYYRFLTE PPLPSKVIVS PAYGYGGT

Sequence ? help Back to Top

Protein Sequence Length: 528 aa Download sequence

MDPRRGAFSS ASFSEQSRID EVRYLHSLWH QGPPRNPNPN PNNVNNNNYI NLRPCNPPIF  60
KKNKKNNNRR SRKRDNRNEE EEEEESSQLV EPVSEHEWPT EPIPEPRNEF AWPDSVPQPD  120
LTSTRVLSEE EQEKFKGIQS QNKALKASQR FLTRNFGSDS EGEVDEDEDF MEDNDGDGEE  180
SEEFKFFFNL FTEDIELRNY YEKNWEGGDF PCFVCGVIGR KCGKRFKSCV SLVHHSNSIS  240
STNQRKAHRA FGQVLCRVLG WEFNRLPTIV LSASGPLSRT LAQASSSQVA NVESGNKVVD  300
TVNADIAGGD QREELNGIAV TYVGDVNGNS ADCENGIKKH DANDQQKEEL NDIAVNSAVN  360
GDGNSADCEA GTKANDANDQ QKALDKEVVD TMGANSGEPT DFNVNSRKDG VAQQDQDFQK  420
ETVNSVGEVN EELYEVYRRA SGTAQNLRRE RERAGRREGE AEIEREVERA GRERGGQGRR  480
RDGGNKVVLI AYVKDKFAPR PELYYRFLTE PPLPSKVIVS PAYGYGGT