PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA01845.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

AP2

Protein Properties

Length: 536aa MW: 59516 Da PI: 6.3521

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA01845.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	34.7	4.4e-11	237	293	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + ++ k + g ++ +++Aa+a++ a++k++g OVA01845.1 237 SIYRGVTRHRWTGRYEAHLWDnSCR-RegQSrKGRQ-GGYDKEDKAARAYDLAALKYWG 293 57*****************5444.2455535555.7799999***********98 PP
2	AP2	53.3	6.7e-17	336	387	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++grW A+I + +k +lg+fgt+eeAa+a++ a+ k++g OVA01845.1 336 SIYRGVTRHHQQGRWQARIGRVAG---NKDLYLGTFGTEEEAAEAYDIAAIKFRG 387 57**************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 536 aa Download sequence
MTPTNWLSFS LSPLELLRSS QQSQILPTTK FMPYESSSSD SSHHYNFDTL YGNEYWSNIR 60 TAQVPPYAQE IQDVKEIKEP NVADFSFLSS LNHSQIQQTV PKLEDFLGGD SSSMHRYNTD 120 SQTETQESSL SNVYEQGTTY FGEQDLKTIT GSAGFQAFSS ANSGSEVDDS SVSVTGTRFS 180 YGNSLSLESR NELLFSDNSN QRLSLGVTSQ SSEKAIVSVD SESSKKVSTE TFGQRTSIYR 240 GVTRHRWTGR YEAHLWDNSC RREGQSRKGR QGGYDKEDKA ARAYDLAALK YWGPTATTNF 300 PVSNYTKEME EMKNMTKQEF IASLRRKSSG FSRGASIYRG VTRHHQQGRW QARIGRVAGN 360 KDLYLGTFGT EEEAAEAYDI AAIKFRGLNA VTNFEMNRYN VEAITNNELP IGGAAKRLKL 420 SLDAESESPQ AHHEQEPPTS SCCSSISTAP GVCYDSAATL YHQNLFHHLN STTDASSQTV 480 VTPTVLSSPS DFYGRNLLYG GPTTPFNINS HFNNTNTSAA NLNHQPWNVA ASYSSN

Sequence ? help Back to Top

Protein Sequence Length: 536 aa Download sequence

MTPTNWLSFS LSPLELLRSS QQSQILPTTK FMPYESSSSD SSHHYNFDTL YGNEYWSNIR  60
TAQVPPYAQE IQDVKEIKEP NVADFSFLSS LNHSQIQQTV PKLEDFLGGD SSSMHRYNTD  120
SQTETQESSL SNVYEQGTTY FGEQDLKTIT GSAGFQAFSS ANSGSEVDDS SVSVTGTRFS  180
YGNSLSLESR NELLFSDNSN QRLSLGVTSQ SSEKAIVSVD SESSKKVSTE TFGQRTSIYR  240
GVTRHRWTGR YEAHLWDNSC RREGQSRKGR QGGYDKEDKA ARAYDLAALK YWGPTATTNF  300
PVSNYTKEME EMKNMTKQEF IASLRRKSSG FSRGASIYRG VTRHHQQGRW QARIGRVAGN  360
KDLYLGTFGT EEEAAEAYDI AAIKFRGLNA VTNFEMNRYN VEAITNNELP IGGAAKRLKL  420
SLDAESESPQ AHHEQEPPTS SCCSSISTAP GVCYDSAATL YHQNLFHHLN STTDASSQTV  480
VTPTVLSSPS DFYGRNLLYG GPTTPFNINS HFNNTNTSAA NLNHQPWNVA ASYSSN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G10510.2	1e-141	AP2 family protein