PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA01362.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

SBP

Protein Properties

Length: 307aa MW: 34318.5 Da PI: 8.5938

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA01362.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	130	8.6e-41	213	290	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +CqvegC++ l +ak+yhrrhkvCe+hskap+v+v g+eqrfCqqCsrfh +sefD++krsCrrrLa+hnerrrk+++ OVA01362.1 213 RCQVEGCHVALVHAKDYHRRHKVCEMHSKAPKVTVLGIEQRFCQQCSRFHVISEFDDSKRSCRRRLAGHNERRRKSSN 290 6**************************************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 307 aa Download sequence
MENGANEQQQ QASNNNNMNG RGHNGNNSNY SWDFWELGST SWSNNNNNNS NNHNNNNSFS 60 EEEEDTARRT TAHALMFCNS VNNAHPHSHL HSAHHHHHHQ NLHLHPHHHN LHHHYHHHSL 120 YAGGSNLHPD PHLTCLKLGK RHYFEDGSIN GGPVLLGERH VDGFQMGKRG RSYDGFGVGV 180 VLSGGPSSSS SATSPSVVGV GVGIGSSTVV VPRCQVEGCH VALVHAKDYH RRHKVCEMHS 240 KAPKVTVLGI EQRFCQQCSR FHVISEFDDS KRSCRRRLAG HNERRRKSSN DSISRNPSQG 300 RCKMCSE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33810.1	1e-35	SBP family protein