PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA01353.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family C2H2
Protein Properties Length: 293aa    MW: 32339.4 Da    PI: 7.0446
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA01353.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.30.00024110132123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 ++C++C + F ++  L  H++ H
  OVA01353.1 110 FSCNYCQRKFYSSQALGGHQNAH 132
                 89*****************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    
MEPHPTEPSL SETSSIISLS ESPICLLETS EENPRTERKQ QQPQHQQQEN NPGFSLDFTL  60
SIKDSDHGSK QELNLIDSLN VGSSSSSSSD QQTSMGSPQV PDESTEPRVF SCNYCQRKFY  120
SSQALGGHQN AHKRERTLAK RDQRFGEAAA AFGYANLHRP YHHYQFSSMG SLPLHGSFNR  180
SLGIQVHSMI HKPSLLLPSS SSSSSSSRSS HVYGYHGWSS RPPIMDHQPA IGRLSSVDNY  240
RTGSAVGSTP RENKFDEAGI GGFWLESGGR LKTSTSTNNN QEDLQKLDLS LKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25160.15e-42C2H2 family protein