PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA01180.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

AP2

Protein Properties

Length: 653aa MW: 71864.7 Da PI: 6.8456

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA01180.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	39	2e-12	302	358	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng.krkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d ++ g rk + g ++ +e+Aa+a++ a++k++g OVA01180.1 302 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqTRKGRQ-GGYDMEEKAARAYDLAALKYWG 358 78*****************77776664346655.77****************98 PP
2	AP2	45.7	1.7e-14	403	452	3	55
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g OVA01180.1 403 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 452 9*************988532...5**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 653 aa Download sequence
MNMEVPSESH HTTHHHNQTQ ASSAAVSAAV PTSFFLSPSH LNNSGICYGV EGENSGFYSH 60 LAVMPLKSDG SLCIMEALSR SQSEGMVPTS SPKLENFLGG ATMGTHQYGN NDREAMALSL 120 DSMYYNQNSE SQTNRQHSLN FLQQPFRQPQ DQIQVQQHPY FSGLTGHEMY QAPLQEENKE 180 IQLGNCSLQL PPMSEDGMSG LKNWVARHYS TNPSMEQKMA GCLTDDGGGS GSVGAMGYGD 240 LQSLSLSMSP GSQSSCVTAP QQISPTGTEC IAMETNKRGS AKMGQKQPVH RKSIDTFGQR 300 TSQYRGVTRH RWTGRYEAHL WDNSCKKEGQ TRKGRQGGYD MEEKAARAYD LAALKYWGPS 360 THINFPLENY QDELEEMKNM SRQEYVAHLR RKSSGFSRGA SMYRGVTRHH QHGRWQARIG 420 RVAGNKDLYL GTFSTQEEAA EAYDIAAIKF RGVNAVTNFD ITRYDVERIT ASNTLLAGEL 480 AKRNKEIESV NEVIDHHSSA QNGRGEASLP EENVGGPDWK MVLNHSQQQQ TTSVEPLDQK 540 PFGISNYRNL PFSMALHDLI GIDSMNSNQQ GMEDSTKLGP HLSNTSSLVT SLSSSREGSP 600 DKTGLSMPFG GPPPASNKFI SPSSSTNSWI PSTQLKPALS MAHLPVFAAW TDA

Sequence ? help Back to Top

Protein Sequence Length: 653 aa Download sequence

MNMEVPSESH HTTHHHNQTQ ASSAAVSAAV PTSFFLSPSH LNNSGICYGV EGENSGFYSH  60
LAVMPLKSDG SLCIMEALSR SQSEGMVPTS SPKLENFLGG ATMGTHQYGN NDREAMALSL  120
DSMYYNQNSE SQTNRQHSLN FLQQPFRQPQ DQIQVQQHPY FSGLTGHEMY QAPLQEENKE  180
IQLGNCSLQL PPMSEDGMSG LKNWVARHYS TNPSMEQKMA GCLTDDGGGS GSVGAMGYGD  240
LQSLSLSMSP GSQSSCVTAP QQISPTGTEC IAMETNKRGS AKMGQKQPVH RKSIDTFGQR  300
TSQYRGVTRH RWTGRYEAHL WDNSCKKEGQ TRKGRQGGYD MEEKAARAYD LAALKYWGPS  360
THINFPLENY QDELEEMKNM SRQEYVAHLR RKSSGFSRGA SMYRGVTRHH QHGRWQARIG  420
RVAGNKDLYL GTFSTQEEAA EAYDIAAIKF RGVNAVTNFD ITRYDVERIT ASNTLLAGEL  480
AKRNKEIESV NEVIDHHSSA QNGRGEASLP EENVGGPDWK MVLNHSQQQQ TTSVEPLDQK  540
PFGISNYRNL PFSMALHDLI GIDSMNSNQQ GMEDSTKLGP HLSNTSSLVT SLSSSREGSP  600
DKTGLSMPFG GPPPASNKFI SPSSSTNSWI PSTQLKPALS MAHLPVFAAW TDA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37750.1	1e-125	AP2 family protein