PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OVA01120.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
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Family | ERF | ||||||||
Protein Properties | Length: 225aa MW: 24944.9 Da PI: 8.9068 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 65 | 1.5e-20 | 30 | 80 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++++GVr ++ +gr++AeIrd ++ ++r++lg+f++ae+Aa+a++aa+++l+g OVA01120.1 30 TRFRGVRKRP-WGRFAAEIRDpWK----KTRVWLGTFDSAEDAARAYDAAARNLRG 80 589*******.**********883....5*************************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 225 aa Download sequence |
MRRGRNTAAT TTAAATAAAA AIGSNPLKET RFRGVRKRPW GRFAAEIRDP WKKTRVWLGT 60 FDSAEDAARA YDAAARNLRG PKAKTNFPLL SPPPSFPHQL PFPPNHNDHF YDPHHQFDHH 120 QQLQVQRPTT SSLSSTVESF SGPRLSELVS VAPTPLSRRH RRHPPPPPIL PDDCHSDCDS 180 SSSVIDDGDI ASSSFRKPLP FDLNFPPSDV VDVVDDDFRI TALCL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G50640.1 | 6e-24 | ERF family protein |