PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA01034.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family FAR1
Protein Properties Length: 382aa    MW: 43012.9 Da    PI: 9.9175
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA01034.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1105.45.1e-3312105291
        FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk....tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                 fYn+YA+++GFs+r+s  ++s+r+g i++r+ vCs++g+r+e++++    +++++r+ra+tr+gCka+++vkk+++gkw+vtk+++eHnHel+p
  OVA01034.1  12 FYNSYARRTGFSTRVSVYHRSRRDGAIICRQIVCSRQGFRHERDRDgnssESRSKRQRAVTRVGCKAMIMVKKQDSGKWVVTKFVKEHNHELVP 105
                 9*******************************************999998889999************************************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 382 aa     Download sequence    
MEFESEEAAR IFYNSYARRT GFSTRVSVYH RSRRDGAIIC RQIVCSRQGF RHERDRDGNS  60
SESRSKRQRA VTRVGCKAMI MVKKQDSGKW VVTKFVKEHN HELVPPDKVH SLRSHRHVSG  120
PARSLIDTLQ AAGIGPSGAD YDTINTAPVL KTPSPMEKQA ASLFTRRMFM KFQEELVETL  180
AITATKTEDS GTITTYRVAK FGEDHKAYMV RFHVFEMKAN CSCQMFEFAG VVLNERAIEL  240
PNNSRESLTV RFNNLRQEAI KFVEEGAKSL HTYNVAIEAL QEAAKRVAAA KAPGTGVAQV  300
GTLVNGSHRQ LNASEGNQSG QPPSFTADEK DKRILELMSE LDNVNQRCEV YRGNLLGVLK  360
DMEEQKLKLS VKVQNVRLNL KD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.16e-68FAR1 family protein