PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OVA00925.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
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Family | SBP | ||||||||
Protein Properties | Length: 204aa MW: 23114.4 Da PI: 8.0699 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 72.7 | 6.3e-23 | 157 | 204 | 1 | 48 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSS CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsr 48 +Cq+egC dl++ak+yhrrhkvCe+hska++v++ gleqrfCqqCsr OVA00925.1 157 RCQAEGCMIDLTNAKHYHRRHKVCEFHSKATKVVAGGLEQRFCQQCSR 204 6**********************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 204 aa Download sequence |
MMNNITSDGG ICSNNNSNPS MVSFVGLECN NQKQYGDWET STHTPTTTNN NNNNASNPNF 60 INPTTNIFDH NFNYPHSSSS STFASNFNPF SQFPDYPSSN FFKKQEGLDG GLYYNSTDRG 120 IGLNLGHRTY FSSTESTMMD RLIRRPRGFY LENQVPRCQA EGCMIDLTNA KHYHRRHKVC 180 EFHSKATKVV AGGLEQRFCQ QCSR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G02065.2 | 4e-35 | SBP family protein |