PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA00712.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

SBP

Protein Properties

Length: 1116aa MW: 124238 Da PI: 8.5376

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA00712.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	128.5	2.6e-40	178	255	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqv++C+ dls+ak+yhrrhkvCe hsk++++lv +++qrfCqqCsrfh lsefDe+krsCrrrLa+hn+rrrk+q+ OVA00712.1 178 MCQVDDCRGDLSNAKDYHRRHKVCELHSKTTKALVGKQMQRFCQQCSRFHPLSEFDEGKRSCRRRLAGHNRRRRKTQP 255 6**************************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 1116 aa Download sequence
MEEVGAQVAH PIFMHQPIPG RFYQAAPMSK KRDLSFHNPN LQQQQPQPQG QQQQQPQQQQ 60 QQQQQQLLLQ QHRFQNPNSN WNPNVWNWDS VKFVAKPSSQ AEVLHLGTAE THQRNKGEDN 120 LKPMVAKKKG YVDEDGENLT LKLGGSLYSV DEPVARPNKR VRSGSPGGGS GSGGSYPMCQ 180 VDDCRGDLSN AKDYHRRHKV CELHSKTTKA LVGKQMQRFC QQCSRFHPLS EFDEGKRSCR 240 RRLAGHNRRR RKTQPEDVSS RMLLSGNQEN SDSGNLDIGN LFKVLARLQG SNPDKNTNAA 300 SIPDRDRLIQ IFSKINALPV AANDATRLPL PGGFDLNVSQ EVSLEHSNKV NGNIFAPSTT 360 DLLAIFSAAL KASSPDALAI LSQRSSHSDD DKPKLNCFDQ VAGFHIQKNS VPGFPSVGGE 420 RSTSTFQSTV EVSSCQVQES RPSLPFQLFG SSTEGDSPPK LGSAWKYFSS DSSSPLEERS 480 PSSSSPVVQK LFPLRTASEI MKHESMSISG EDNGMAEVST TRGGWNPPLE LFKRPNERVS 540 NSSIQNRASQ PGYTSSSGSD HSPSTSNSDF QDRTGRIIFK LFDKDPGSLP RTLRTEILNW 600 LSHSPSEIES YIRPGCVVLS IYIAMPYTSW EQLQEDLLQR VKLLVRDSNS DFWRNGRFCI 660 HTDRRLASHK DGKIRLCKSW RTRSAPELTS VSPLAVVGGK QTSLVLRGRN LTVPGTKIHC 720 AYMGGYMSKE VTGSSVTLYD DTSAESFTFP SGIPNILGRC FIEVVENGFK GNSFPLIIAD 780 STVCRELRLL EPELEVDART GNVIVEDQNQ DFERTRSRED ILHFLNELGW LFQRKSTSSR 840 PDGPDFSLNR FKFLFTFSVE RDWCALVKTL LDILAERNLE AGALSRESLE TLAEIHLLNK 900 AVKRKCRNMV KLLIRFSLTC TTDASKKYLF FPSQMGPGGV TPLHLAASMH DSEDIVDALT 960 DDPQQIGLSC WNSLSDANGQ SPYAYASMRN NHNYNRLVAR KIAEWKHGQV SIPIGDEISS 1020 LQQQKQQEPW MGGEEAERPN PKQLQLQSRG PCSRCAVVVT RHYMIPGTHG LLHRPYVHSM 1080 LAIAAVCVCV CLFLRGSPDI GAVAPFKWEN LGSGIS

Sequence ? help Back to Top

Protein Sequence Length: 1116 aa Download sequence

MEEVGAQVAH PIFMHQPIPG RFYQAAPMSK KRDLSFHNPN LQQQQPQPQG QQQQQPQQQQ  60
QQQQQQLLLQ QHRFQNPNSN WNPNVWNWDS VKFVAKPSSQ AEVLHLGTAE THQRNKGEDN  120
LKPMVAKKKG YVDEDGENLT LKLGGSLYSV DEPVARPNKR VRSGSPGGGS GSGGSYPMCQ  180
VDDCRGDLSN AKDYHRRHKV CELHSKTTKA LVGKQMQRFC QQCSRFHPLS EFDEGKRSCR  240
RRLAGHNRRR RKTQPEDVSS RMLLSGNQEN SDSGNLDIGN LFKVLARLQG SNPDKNTNAA  300
SIPDRDRLIQ IFSKINALPV AANDATRLPL PGGFDLNVSQ EVSLEHSNKV NGNIFAPSTT  360
DLLAIFSAAL KASSPDALAI LSQRSSHSDD DKPKLNCFDQ VAGFHIQKNS VPGFPSVGGE  420
RSTSTFQSTV EVSSCQVQES RPSLPFQLFG SSTEGDSPPK LGSAWKYFSS DSSSPLEERS  480
PSSSSPVVQK LFPLRTASEI MKHESMSISG EDNGMAEVST TRGGWNPPLE LFKRPNERVS  540
NSSIQNRASQ PGYTSSSGSD HSPSTSNSDF QDRTGRIIFK LFDKDPGSLP RTLRTEILNW  600
LSHSPSEIES YIRPGCVVLS IYIAMPYTSW EQLQEDLLQR VKLLVRDSNS DFWRNGRFCI  660
HTDRRLASHK DGKIRLCKSW RTRSAPELTS VSPLAVVGGK QTSLVLRGRN LTVPGTKIHC  720
AYMGGYMSKE VTGSSVTLYD DTSAESFTFP SGIPNILGRC FIEVVENGFK GNSFPLIIAD  780
STVCRELRLL EPELEVDART GNVIVEDQNQ DFERTRSRED ILHFLNELGW LFQRKSTSSR  840
PDGPDFSLNR FKFLFTFSVE RDWCALVKTL LDILAERNLE AGALSRESLE TLAEIHLLNK  900
AVKRKCRNMV KLLIRFSLTC TTDASKKYLF FPSQMGPGGV TPLHLAASMH DSEDIVDALT  960
DDPQQIGLSC WNSLSDANGQ SPYAYASMRN NHNYNRLVAR KIAEWKHGQV SIPIGDEISS  1020
LQQQKQQEPW MGGEEAERPN PKQLQLQSRG PCSRCAVVVT RHYMIPGTHG LLHRPYVHSM  1080
LAIAAVCVCV CLFLRGSPDI GAVAPFKWEN LGSGIS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G20980.1	0.0	SBP family protein