PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA00705.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

FAR1

Protein Properties

Length: 521aa MW: 58255.7 Da PI: 7.3325

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA00705.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	97.4	1.6e-30	85	175	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fYn+YA+++GFs+r+s+ ++s++++ i++r+ vCs++g+++ ++++ ++k++r+ra+ r+gCka+++vkk+++gkw+v+k+ +eHnHel+p OVA00705.1 85 FYNSYARRIGFSTRVSTYHRSRHDDAIICRQIVCSRQGFHQGRDRNsKRKQKRPRAVARVGCKAMIMVKKKNSGKWVVSKIFKEHNHELVP 175 9**************************************9998856778889*********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 521 aa Download sequence
MEFEPLNNME NDVMEFDIGS GEEEDDAAAA GIVVEHPDDE ADDYEDEVFD GSGRRELLGA 60 TTDADADLEP YEGMEFESEE AARIFYNSYA RRIGFSTRVS TYHRSRHDDA IICRQIVCSR 120 QGFHQGRDRN SKRKQKRPRA VARVGCKAMI MVKKKNSGKW VVSKIFKEHN HELVPPDKVH 180 CLRSHKHISG PARSLIDTLH AAGIGPSGVM SVLIKESGGV NNVGFSTVDY RNYLTSRQRH 240 FGGGAQQVLA KQYEKAVASR HEKEVKADYD TINTAPVLKT PSPMEKQAAN LYTRRIFMKF 300 QEELVETLAI TATKIEDSGT VTTYRVAKFG EDHKAYIVRH TLAVFRVTNV LTLPSHYVLK 360 RWSRNAKSGV VVDDHALELA SNSKESSVDR FNNLRQEVIK YVDEGAKSSH TYNVAMDALK 420 EAIKKVIGAK KHGAGVTQVG TLLSGSNGEV HLDEGNRLGQ LQSCSTDEKE KKIAELVSEL 480 ESANERCEVY RANLLAVLKD MEEQKLKLSV KVQNVRLGLK D

Sequence ? help Back to Top

Protein Sequence Length: 521 aa Download sequence

MEFEPLNNME NDVMEFDIGS GEEEDDAAAA GIVVEHPDDE ADDYEDEVFD GSGRRELLGA  60
TTDADADLEP YEGMEFESEE AARIFYNSYA RRIGFSTRVS TYHRSRHDDA IICRQIVCSR  120
QGFHQGRDRN SKRKQKRPRA VARVGCKAMI MVKKKNSGKW VVSKIFKEHN HELVPPDKVH  180
CLRSHKHISG PARSLIDTLH AAGIGPSGVM SVLIKESGGV NNVGFSTVDY RNYLTSRQRH  240
FGGGAQQVLA KQYEKAVASR HEKEVKADYD TINTAPVLKT PSPMEKQAAN LYTRRIFMKF  300
QEELVETLAI TATKIEDSGT VTTYRVAKFG EDHKAYIVRH TLAVFRVTNV LTLPSHYVLK  360
RWSRNAKSGV VVDDHALELA SNSKESSVDR FNNLRQEVIK YVDEGAKSSH TYNVAMDALK  420
EAIKKVIGAK KHGAGVTQVG TLLSGSNGEV HLDEGNRLGQ LQSCSTDEKE KKIAELVSEL  480
ESANERCEVY RANLLAVLKD MEEQKLKLSV KVQNVRLGLK D

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	6e-83	FAR1 family protein