PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA00610.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

Nin-like

Protein Properties

Length: 946aa MW: 104704 Da PI: 6.0284

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA00610.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	91.4	7e-29	628	678	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek+isl++l++yF++++kdAAk++gvc+T+LKriCRq+GI RWP+Rkik++ OVA00610.1 628 EKTISLQVLRQYFAGSLKDAAKSIGVCPTTLKRICRQHGITRWPSRKIKKV 678 799**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 946 aa Download sequence
MEDGRFPLDN MSGALSDPSA DFDLMDELLL GGCWLETTEG SDFLQPSSSN STAFFNSSYF 60 LPTTSEGLNP NPPQNNSQEE TGGPIVPRNP SSLEPQTETS IATRYLNQNT FQIAECTGQS 120 ERTPIEGSFE LSRRWWIGPS TNSRPLSSVR DRLIHALGNI KDSIKHGDVL IQIWVPVKRG 180 GKQVLITNDQ PFSLDTSCQR LISYRNVSMK YQFPADEDSN ESVGLPGRVF LGKVPEWTPD 240 VRFFSSDEYP RIDHAQLYDV RGTLALPIFE RGSRSCLGVV EVVMTTQKIN YRPELENVCR 300 ALEAVNLRGS EVASPPVVKA PHVSYQAVLP EILEVLRAVC ETHRLPLAQT WVPCILQGKE 360 GCRHSDENYT NCVSTVDSAC CVADPQILGF HEACSEHHLF RGQGVAGRAF RTNQPCFSSN 420 ITTFSKKDYP LSHYARMFGL QAAVAIRLRS IYTGTVDYVL EFFLPVNCRD IEEQKMMLSS 480 LSIIIQQVCR SLRVVMDKEL EEETNLNTSE VVVPSNEGPN REVMPNLGPA PSKGSSEEES 540 SWITHMMEAQ RKGKSLQKEE PTEGFKVTTH WDSPEVVLQP GQTFTEFKQH RQDSGLKDNA 600 ESGGDSSLGD RRFSSMSKTG EKRRTKMEKT ISLQVLRQYF AGSLKDAAKS IGVCPTTLKR 660 ICRQHGITRW PSRKIKKVGH SLRKLQVVID SVQGAEGAFQ IGSIYANFPE LTSPNLSGTS 720 PFSASKPNDQ SNPSNTQPEG GGFSPQAAAS KSPSSSCSQS SSSSLCCSSG KQQNPLIGLA 780 GNEDASMAET AGGTLKRARS DAELHSTGQE DPGFLARSQS QKCFSEHPSL DDSLPPLPNS 840 SRFCRDRGAL RMKVTYGEEK VRFSMQLNWV FKDLQQEIAK RFHIDDMSRI DLKYLDDDSE 900 WVLLTCDADL EECMDIYKSS QTQTIKLSVH HASLPNLGSS FGSNAP

Sequence ? help Back to Top

Protein Sequence Length: 946 aa Download sequence

MEDGRFPLDN MSGALSDPSA DFDLMDELLL GGCWLETTEG SDFLQPSSSN STAFFNSSYF  60
LPTTSEGLNP NPPQNNSQEE TGGPIVPRNP SSLEPQTETS IATRYLNQNT FQIAECTGQS  120
ERTPIEGSFE LSRRWWIGPS TNSRPLSSVR DRLIHALGNI KDSIKHGDVL IQIWVPVKRG  180
GKQVLITNDQ PFSLDTSCQR LISYRNVSMK YQFPADEDSN ESVGLPGRVF LGKVPEWTPD  240
VRFFSSDEYP RIDHAQLYDV RGTLALPIFE RGSRSCLGVV EVVMTTQKIN YRPELENVCR  300
ALEAVNLRGS EVASPPVVKA PHVSYQAVLP EILEVLRAVC ETHRLPLAQT WVPCILQGKE  360
GCRHSDENYT NCVSTVDSAC CVADPQILGF HEACSEHHLF RGQGVAGRAF RTNQPCFSSN  420
ITTFSKKDYP LSHYARMFGL QAAVAIRLRS IYTGTVDYVL EFFLPVNCRD IEEQKMMLSS  480
LSIIIQQVCR SLRVVMDKEL EEETNLNTSE VVVPSNEGPN REVMPNLGPA PSKGSSEEES  540
SWITHMMEAQ RKGKSLQKEE PTEGFKVTTH WDSPEVVLQP GQTFTEFKQH RQDSGLKDNA  600
ESGGDSSLGD RRFSSMSKTG EKRRTKMEKT ISLQVLRQYF AGSLKDAAKS IGVCPTTLKR  660
ICRQHGITRW PSRKIKKVGH SLRKLQVVID SVQGAEGAFQ IGSIYANFPE LTSPNLSGTS  720
PFSASKPNDQ SNPSNTQPEG GGFSPQAAAS KSPSSSCSQS SSSSLCCSSG KQQNPLIGLA  780
GNEDASMAET AGGTLKRARS DAELHSTGQE DPGFLARSQS QKCFSEHPSL DDSLPPLPNS  840
SRFCRDRGAL RMKVTYGEEK VRFSMQLNWV FKDLQQEIAK RFHIDDMSRI DLKYLDDDSE  900
WVLLTCDADL EECMDIYKSS QTQTIKLSVH HASLPNLGSS FGSNAP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35270.1	0.0	Nin-like family protein