PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA00473.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family C3H
Protein Properties Length: 337aa    MW: 37588.5 Da    PI: 8.2016
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA00473.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH37.44.4e-1284108126
                 --S---SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH   1 yktelCrffartGtCkyGdrCkFaHg 26 
                 +kt+lC  f + G+C+yGd+C+FaHg
  OVA00473.1  84 FKTRLCAKFKA-GICPYGDNCNFAHG 108
                 79*********.*************9 PP

2zf-CCCH20.96.3e-07147167525
                 --SGGGGTS--TTTTT-SS-S CS
     zf-CCCH   5 lCrffartGtCkyGdrCkFaH 25 
                 lC+ f  + +C+yGdrC+F H
  OVA00473.1 147 LCKKFCNGEECPYGDRCNFLH 167
                 888888855************ PP

3zf-CCCH41.71.9e-13226252127
                 --S---SGGGGTS--TTTTT-SS-SSS CS
     zf-CCCH   1 yktelCrffartGtCkyGdrCkFaHgp 27 
                 +kt++C  +  tG+C++G++C+FaHg+
  OVA00473.1 226 WKTRICIKWDTTGQCPFGEKCHFAHGQ 252
                 8************************97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    
MSVPAPPPQF FAPFTAVNDA SMFWPQVPIE NEQSKQSNYT EFPPFKKPRN FEDSLSNSFQ  60
NQAMNPRMPP QNPPINRGIG RIFFKTRLCA KFKAGICPYG DNCNFAHGVE DIRKPPPNWQ  120
EIVASHEEDR TTGNWDEDQK IINRLKLCKK FCNGEECPYG DRCNFLHKDI GKCREDSTRF  180
RESSAISIGT TGSPGSNGIG SNQPDINGLL NSVADANWGI QKPVFWKTRI CIKWDTTGQC  240
PFGEKCHFAH GQAELQKYGG QNEMETGSAT IASLKCVPNS SNDAAPSSTG TGVLCKQQVQ  300
IKKCLLKWKG TKKISRIYAD WIDDMPLPLS SPTNVES
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19360.11e-83C3H family protein