PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA00360.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family C3H
Protein Properties Length: 278aa    MW: 31357.8 Da    PI: 7.8178
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA00360.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH29.41.4e-093454526
                --SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH  5 lCrffartGtCkyGdrCkFaHg 26
                 C++f+r G C++Gd+C FaHg
  OVA00360.1 34 ACSDFRR-GNCPRGDSCEFAHG 54
                6******.*************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    
MRSRSHDWTD CPFAHPGEKA RRRDPRRFHY SGNACSDFRR GNCPRGDSCE FAHGVFECWL  60
HPARYRTQVC KDGKNCKRKV CFFAHTPKQL RILPQSQSPQ SPDHHPLTDH QFSLSKTKTH  120
NCCCVYCHSS SSVSSSPTST LMGFSHLSSN SPPLSPTTTI INSPSSTSEL SNKQQQSLLG  180
MLSYKNKLME LVSSLEAMDL NEVNSPTNTS VNDQSNYFTW GSCVSSPNYE HPQQFILSPD  240
STRQATRSSK DFFSEDYELN NINGGSCPDL EWVNELVM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G03790.14e-63C3H family protein