PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OVA00335.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
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Family | FAR1 | ||||||||
Protein Properties | Length: 137aa MW: 15790.9 Da PI: 7.418 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 47.4 | 6.3e-15 | 54 | 133 | 1 | 82 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrt..fvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkle 82 +f+++YA+++GF vrk++++k ++g + t f C + gk++++ ++ + ++r++t+tgCk k++ + e d+kw+++++ OVA00335.1 54 DFFKTYARQIGFPVRKRSTNKD-KDGVLRWVTfpFACARGGKTNTTFSN---RLKPRSNTQTGCKVKITARFELDEKWMISQVM 133 6****************99998.6666666552279*******998877...999**************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 137 aa Download sequence |
MDSSLNLGIE VESSDVEILG DDVVDVDHEL KKDQNEIVEP KVGMPFASHE ELYDFFKTYA 60 RQIGFPVRKR STNKDKDGVL RWVTFPFACA RGGKTNTTFS NRLKPRSNTQ TGCKVKITAR 120 FELDEKWMIS QVMQWRN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G32250.3 | 2e-12 | FAR1 family protein |