PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA00297.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

AP2

Protein Properties

Length: 440aa MW: 49452.9 Da PI: 8.1152

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA00297.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	33.9	7.6e-11	114	170	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng..krkrfslgkfgtaeeAakaaiaarkkleg 55 s+++GV++++++gr++A+++d s+n k+k + g ++ +e Aa+a++ a++k++g OVA00297.1 114 SRFRGVSRHRWTGRFEAHLWDkGSWNVtqKKKGKQ-GAYDDEECAARAYDLAALKYWG 170 789****************88887784446666.999*************98 PP
2	AP2	50.5	5.2e-16	213	264	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I + g +k+ +lg++ t eeAa a++ a+ +++g OVA00297.1 213 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYSTQEEAAHAYDIAAIEYRG 264 89**99******99966...3.6***********************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 440 aa Download sequence
MNVQTESCLD NTYFGVEKGQ QSLISTPPKR VNLLDRLHPS LILQCESNPG RRRLSADNSE 60 GRVVKCVKRR RREPVVADTG SNTDQKDQQQ VDQSSTSTTT TTTTTTTTTV KRSSRFRGVS 120 RHRWTGRFEA HLWDKGSWNV TQKKKGKQGA YDDEECAARA YDLAALKYWG PTTFTNFPVS 180 DYEKEIEVMQ NVTKEEYLAS LRRKSSGFSR GVSKYRGVAR HHHNGRWEAR IGRVFGNKYL 240 YLGTYSTQEE AAHAYDIAAI EYRGINAVTN FDLSTYIRWL RPGANGLVAS QEARSTGEPQ 300 ALPKFQSNSF TVDDLGSPRN QEVFRREISV SSCSTKSSSS PTALSLLLRS SIFRELVEKN 360 SYSTNDEIDG DETKQLVQMG SEDEFGGIFY DGIADIPYVC STNVTMPSIE LQEEIESPSP 420 VYNQTGHSIW NGVLSMSSMH

Sequence ? help Back to Top

Protein Sequence Length: 440 aa Download sequence

MNVQTESCLD NTYFGVEKGQ QSLISTPPKR VNLLDRLHPS LILQCESNPG RRRLSADNSE  60
GRVVKCVKRR RREPVVADTG SNTDQKDQQQ VDQSSTSTTT TTTTTTTTTV KRSSRFRGVS  120
RHRWTGRFEA HLWDKGSWNV TQKKKGKQGA YDDEECAARA YDLAALKYWG PTTFTNFPVS  180
DYEKEIEVMQ NVTKEEYLAS LRRKSSGFSR GVSKYRGVAR HHHNGRWEAR IGRVFGNKYL  240
YLGTYSTQEE AAHAYDIAAI EYRGINAVTN FDLSTYIRWL RPGANGLVAS QEARSTGEPQ  300
ALPKFQSNSF TVDDLGSPRN QEVFRREISV SSCSTKSSSS PTALSLLLRS SIFRELVEKN  360
SYSTNDEIDG DETKQLVQMG SEDEFGGIFY DGIADIPYVC STNVTMPSIE LQEEIESPSP  420
VYNQTGHSIW NGVLSMSSMH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	51	72	RRRLSADNSEGRVVKCVKRRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G54320.3	4e-89	AP2 family protein