PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OUZ99541.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

FAR1

Protein Properties

Length: 821aa MW: 93602.7 Da PI: 7.3702

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OUZ99541.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	59.3	1.2e-18	106	193	1	91
FAR1 1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 ++YneYA+++GF+vr+ +++ + ++ ++i ++ +vCs+eg+ + +k r++r+++r +C a +++k+ + +k+ ++++++eH+H+l+p OUZ99541.1 106 DYYNEYARKIGFRVRILRTNMNrTHRNKIHRQVLVCSCEGTYKMIRKP----RKRRESKRFECMAVFEIKLITGDKYALIRFKSEHTHDLVP 193 69***********988877734455699999*****998877....999********************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 821 aa Download sequence
MESQSENPNP NITTTSTTTT TVSESVAPDQ ALDGENSVSA IIVRPPENPV PEDPSPITID 60 ACEVVPILAS NDNEKTPEVD QGFRDLDELV EPKVGMIFDT AKEAFDYYNE YARKIGFRVR 120 ILRTNMNRTH RNKIHRQVLV CSCEGTYKMI RKPRKRRESK RFECMAVFEI KLITGDKYAL 180 IRFKSEHTHD LVPPKFSNYL KTPKRLEAAQ IGIIDRSTSG TKQAEVFSYL PEEAGISDSN 240 NTRTGFFKRG DAHFLLDYFR QKKQENKHFF YSFRTNGDGK ICGVFFCDAK SRRDYGLFGD 300 AVCFDTTFKT NNYDMVCAPV VGMNNHGQAT LFGCGLLDGE TTDAVVWLFT TFLEAMGGKK 360 PISVFTDQSA AISNAVSAVF PESHHGLCLW HIFQNASKHL TKVFKAFKAF SAEFKACIYD 420 PETVEEFEQN WSKLLDNYGL RGTEWLQGLY ELKQKWAQVY SPGHFCAGMT TTERCESISK 480 FLKAYFSTGS ILLREFVDQY SKAMADRYEK EKEAEKKTQQ TAPNLISAWA VEREASKIYT 540 REMFYGFQEG LQQTIDLLLE LEKDDGSIRT YKATEMEGQK KIRTLTYNHS EQSVSCTCRK 600 FEFNGILCSH ALKLFRDLQY KILPPQYYLK RWTRKVTDED VFDPSGELIP NDSDPSSTAR 660 YSELLQISQR IVTRGSKSEE VFSLTKSLLL EVEAKIEARV NSKEERRPAA KKSTPNTHQN 720 PVSNLNEAAP TQETFAMVQQ QPNYSQNGWQ WMNQRVIHPQ GVHPRDIIPP YNFVPSQQQR 780 PFLQNNLFTS QQNLPISVEG HIHGYDRNSV VIKTSLAGCS S

Sequence ? help Back to Top

Protein Sequence Length: 821 aa Download sequence

MESQSENPNP NITTTSTTTT TVSESVAPDQ ALDGENSVSA IIVRPPENPV PEDPSPITID  60
ACEVVPILAS NDNEKTPEVD QGFRDLDELV EPKVGMIFDT AKEAFDYYNE YARKIGFRVR  120
ILRTNMNRTH RNKIHRQVLV CSCEGTYKMI RKPRKRRESK RFECMAVFEI KLITGDKYAL  180
IRFKSEHTHD LVPPKFSNYL KTPKRLEAAQ IGIIDRSTSG TKQAEVFSYL PEEAGISDSN  240
NTRTGFFKRG DAHFLLDYFR QKKQENKHFF YSFRTNGDGK ICGVFFCDAK SRRDYGLFGD  300
AVCFDTTFKT NNYDMVCAPV VGMNNHGQAT LFGCGLLDGE TTDAVVWLFT TFLEAMGGKK  360
PISVFTDQSA AISNAVSAVF PESHHGLCLW HIFQNASKHL TKVFKAFKAF SAEFKACIYD  420
PETVEEFEQN WSKLLDNYGL RGTEWLQGLY ELKQKWAQVY SPGHFCAGMT TTERCESISK  480
FLKAYFSTGS ILLREFVDQY SKAMADRYEK EKEAEKKTQQ TAPNLISAWA VEREASKIYT  540
REMFYGFQEG LQQTIDLLLE LEKDDGSIRT YKATEMEGQK KIRTLTYNHS EQSVSCTCRK  600
FEFNGILCSH ALKLFRDLQY KILPPQYYLK RWTRKVTDED VFDPSGELIP NDSDPSSTAR  660
YSELLQISQR IVTRGSKSEE VFSLTKSLLL EVEAKIEARV NSKEERRPAA KKSTPNTHQN  720
PVSNLNEAAP TQETFAMVQQ QPNYSQNGWQ WMNQRVIHPQ GVHPRDIIPP YNFVPSQQQR  780
PFLQNNLFTS QQNLPISVEG HIHGYDRNSV VIKTSLAGCS S

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	151	158	RKPRKRRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-110	FAR1 family protein