PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OUZ99355.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

C2H2

Protein Properties

Length: 494aa MW: 54643.5 Da PI: 5.7413

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OUZ99355.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	22.3	3.3e-07	283	304	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 C++Cgk F+r nL+ H+r H OUZ99355.1 283 FCEICGKGFKRDANLRMHMRAH 304 6*******************99 PP
2	zf-C2H2	10.8	0.0015	399	414	6	21
TTEEESSHHHHHHHHH CS zf-C2H2 6 CgksFsrksnLkrHir 21 Cg++Fsrk+ L H+ OUZ99355.1 399 CGTTFSRKDKLFGHMA 414 **************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 494 aa Download sequence
MASVSGTSIT GTNGNNFRLE VPNSSSDFQS SLFNLSQLHQ KMDSLQQFLS ESIDRNTLLG 60 KDQMDLVSNE ISSAIHQIIV NGAALISSTQ SHQNLVSEEG TVLMSGNFVD RTDFNSPTSL 120 NALLRSQIAG KAVESIDLTV QMSYPRSSVS EDLIGSETNN QLDFSLSSEK LKGRTDPTDS 180 NSLMRTQIAM NAPVTVFSSI TAEAVKPVDL STVQMRFPAV EGSNTSAVLR GFGMNNPDFN 240 LSFEKMKGKI DPKVEQMKDE IDDGDCEIVE LDAVELLAEH IHFCEICGKG FKRDANLRMH 300 MRAHGNQFKT PEALAKPDKG IESRHKVRFS CPFVGCNRNK SHKKFRPLKS AVCVKSHFRR 360 SHCPKMYSCN RCNKKSFSIL ADLKGHLKHC GESKWRCSCG TTFSRKDKLF GHMALFEGHM 420 PAIAEEGERS KGPIAMEEDE ETQLEDESVP DGFDQGLFFD SLQENFSSID DGDSLKDVFG 480 SPILGTGLEG WFDM

Sequence ? help Back to Top

Protein Sequence Length: 494 aa Download sequence

MASVSGTSIT GTNGNNFRLE VPNSSSDFQS SLFNLSQLHQ KMDSLQQFLS ESIDRNTLLG  60
KDQMDLVSNE ISSAIHQIIV NGAALISSTQ SHQNLVSEEG TVLMSGNFVD RTDFNSPTSL  120
NALLRSQIAG KAVESIDLTV QMSYPRSSVS EDLIGSETNN QLDFSLSSEK LKGRTDPTDS  180
NSLMRTQIAM NAPVTVFSSI TAEAVKPVDL STVQMRFPAV EGSNTSAVLR GFGMNNPDFN  240
LSFEKMKGKI DPKVEQMKDE IDDGDCEIVE LDAVELLAEH IHFCEICGKG FKRDANLRMH  300
MRAHGNQFKT PEALAKPDKG IESRHKVRFS CPFVGCNRNK SHKKFRPLKS AVCVKSHFRR  360
SHCPKMYSCN RCNKKSFSIL ADLKGHLKHC GESKWRCSCG TTFSRKDKLF GHMALFEGHM  420
PAIAEEGERS KGPIAMEEDE ETQLEDESVP DGFDQGLFFD SLQENFSSID DGDSLKDVFG  480
SPILGTGLEG WFDM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34370.3	5e-78	C2H2 family protein