PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022159779.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family MYB_related
Protein Properties Length: 318aa    MW: 34718.3 Da    PI: 9.0338
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022159779.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding38.62.5e-1258102147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      r +WT+ E++++++a +++  + Wk+I + +g  +t  q++s+ qky
   XP_022159779.1  58 RESWTEPEHDKFLEALQLFDRD-WKKIEAFVG-SKTVIQIRSHAQKY 102
                      789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    
MVSNNPNPSE GFYLDPSGVA LPGLGPFATT MAASAAAAAA AEDLSKKIRK PYTITKSRES  60
WTEPEHDKFL EALQLFDRDW KKIEAFVGSK TVIQIRSHAQ KYFLKVQKTG GGEHLPPPRP  120
KRKAAHPYPQ KASKNVAMPS QVPGSFQSTS PLVEPGYIIR PDSSSILACP APGGAVPSWT  180
VNSVQPLNSS QVPTVANNCC SGTESPSKAR TLVEATDQGS NNHPLRVLPD FTQVYSFIGS  240
VFDPNASGHL QKLKRMDPID VETVLLLMRN LSINLISPDF EDHRRLLSSY EIDTGPIRHS  300
DVDKPIYGND HKPRLVSN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52660.21e-114MYB_related family protein