PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022159619.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

bHLH

Protein Properties

Length: 341aa MW: 38048.6 Da PI: 7.0686

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022159619.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.4	1.1e-12	130	181	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h +Er+RR+++N+ ++ Lr+l+P++ + ++ + a+i A++++k+L+ XP_022159619.1 130 QRMTHITVERNRRKQMNHYLSVLRSLMPHS---YVQRGDQASIIGGAINFVKELE 181 79**************************...9****************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 341 aa Download sequence
MALEAVVFQQ DPFGQGSSSK DLYNLMGSAA AIWGSYDEEF SKEDEDFSFL GNQTENSPNY 60 YHCGSDQWNY YSCVDPSNFL NEPQAPPPQP QPPHDDSSSP VGQIVGGGRW RAARRRRWKT 120 EKNKEEIENQ RMTHITVERN RRKQMNHYLS VLRSLMPHSY VQRGDQASII GGAINFVKEL 180 EQQVHFLSAQ THVKPSPNAA PNIIAPPFSH FFSFPHYSSS TSTSTSTSAS APSGLTSMAA 240 SAVPSNQIQS SLADVEVSMV DSHANLKIRC KKLPKQLLKI VSGLHRLHLS VLHLNVSTLH 300 QIVLYSFSLK VEEYCGLSSV DEIARAVHQL VCRIQEEAFS L

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	131	142	RMTHITVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72210.1	6e-59	bHLH family protein