PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022159370.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | SBP | ||||||||
Protein Properties | Length: 129aa MW: 13634.3 Da PI: 8.6088 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 82.8 | 4.7e-26 | 80 | 129 | 1 | 50 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEE CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfh 50 +CqvegC++dls+ak y++rhkvC++hsk+p+v+v+gleqrfCqqCsrfh XP_022159370.1 80 RCQVEGCRVDLSDAKAYYSRHKVCTMHSKSPKVIVAGLEQRFCQQCSRFH 129 6************************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 129 aa Download sequence |
MEMDCSSLTE SGGSSTSSPH NSSAESVNGL KFGQKIYFED VGIGELPKSG GGSFSSSAGI 60 ATAPTKKARG GVVQAAQPPR CQVEGCRVDL SDAKAYYSRH KVCTMHSKSP KVIVAGLEQR 120 FCQQCSRFH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G57920.1 | 5e-30 | SBP family protein |