PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022159255.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

bHLH

Protein Properties

Length: 511aa MW: 56450.4 Da PI: 6.6771

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022159255.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	49.5	7.6e-16	290	336	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 hn Er+RRdriN+++ L+el+P + K +Ka++L +A+eY+ksLq XP_022159255.1 290 VHNLSERKRRDRINEKMKALQELIPRgN------KADKASMLDEAIEYLKSLQ 336 6**********************955......****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 511 aa Download sequence
MNHCVPDFET DDDFSLPTSS APSLCKASSM SDGEVIELVW KNRQVVMQNQ TQNSGTKSNG 60 TTVTAEQIRN RDIRALHQEE KPELFMQEDE MVSWLQYPLD EEPPLDHSFC DQLVYTTQPQ 120 SIEQNASVTA QVRTSYGMEF RPVTPMSTTA TSTMIARPPI PPMRTTESEM NTNSFGLFSR 180 YTRSVESGPS SSRSTVRESP ASELRRTAIA DASSGGLACR LMSGGGVAAT SSAEPTIRRT 240 TSLEDRKRKG KEKDDPEYQC HSTDVEFETS DAKKQVRVPT STKRSRAAEV HNLSERKRRD 300 RINEKMKALQ ELIPRGNKAD KASMLDEAIE YLKSLQLQVQ MMSMGCGMLP MMFPGMQQFV 360 PPMGMGLGMG MGMETSANRP MMPYPNMLAG STFPRQAGAA QLGPTFPFAA FHMAHIASND 420 PSRIQGTNQS DPMHSSPGMQ NINQSRMSSS LDGYQQFLGS QQMQVPAAVS QRSPQNQPAA 480 PPGTHNQHTN SRSGLENIEN YKSGNRTMDP C

Sequence ? help Back to Top

Protein Sequence Length: 511 aa Download sequence

MNHCVPDFET DDDFSLPTSS APSLCKASSM SDGEVIELVW KNRQVVMQNQ TQNSGTKSNG  60
TTVTAEQIRN RDIRALHQEE KPELFMQEDE MVSWLQYPLD EEPPLDHSFC DQLVYTTQPQ  120
SIEQNASVTA QVRTSYGMEF RPVTPMSTTA TSTMIARPPI PPMRTTESEM NTNSFGLFSR  180
YTRSVESGPS SSRSTVRESP ASELRRTAIA DASSGGLACR LMSGGGVAAT SSAEPTIRRT  240
TSLEDRKRKG KEKDDPEYQC HSTDVEFETS DAKKQVRVPT STKRSRAAEV HNLSERKRRD  300
RINEKMKALQ ELIPRGNKAD KASMLDEAIE YLKSLQLQVQ MMSMGCGMLP MMFPGMQQFV  360
PPMGMGLGMG MGMETSANRP MMPYPNMLAG STFPRQAGAA QLGPTFPFAA FHMAHIASND  420
PSRIQGTNQS DPMHSSPGMQ NINQSRMSSS LDGYQQFLGS QQMQVPAAVS QRSPQNQPAA  480
PPGTHNQHTN SRSGLENIEN YKSGNRTMDP C

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	295	300	ERKRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G20180.2	9e-56	bHLH family protein