PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022159188.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

Trihelix

Protein Properties

Length: 495aa MW: 56707.9 Da PI: 4.9925

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022159188.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	93.5	2.1e-29	38	122	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW+++e++aL+++r++m++++r+++lk+plWeevs++++e g++rs+k+Ckek+en+ k++k++k++++++ + ++++yf+qlea XP_022159188.1 38 RWPREETMALLKVRSSMDTAFRDASLKAPLWEEVSRNLAELGYNRSAKKCKEKFENIYKYHKRTKDSRSGK--ANGKNYRYFEQLEA 122 8******************************************************************96..55668*****85 PP
2	trihelix	100.1	1.9e-31	319	404	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW+k+e+ aLi++r++++ +++++ k+plWee+s +m++ g+ r++k+Ckekwen+nk++k++ke++kkr +e+s+tcpyf+ql+a XP_022159188.1 319 RWPKEEIDALIQLRTNLQMKYQENGPKGPLWEEISLAMKKLGYDRNAKRCKEKWENINKYFKRVKESNKKR-PEDSKTCPYFQQLDA 404 8*******************************************************************8.99*********85 PP

Sequence ? help Back to Top
Protein Sequence Length: 495 aa Download sequence
MLENSASPEN SAAAAEEDAA GGSVGLAEEA DRSWAGNRWP REETMALLKV RSSMDTAFRD 60 ASLKAPLWEE VSRNLAELGY NRSAKKCKEK FENIYKYHKR TKDSRSGKAN GKNYRYFEQL 120 EALDNHPLLP SQADSMEEMP RIIPNNIVHN AIPCSVVNPG SNFVDTTTTS ISTSATSCSS 180 KESGGTMKKK RKFVEFFERL MNEVIEKQEK LQKKFVEALE KCEQERLARE EEWKMQELAR 240 IKKERERLNH ERSIAAAKDA AVLSFLKMFS EQVGAVQFPE SSILMEHFMD KQDDGNVDRN 300 TSNQENSNNG NSNQISSSRW PKEEIDALIQ LRTNLQMKYQ ENGPKGPLWE EISLAMKKLG 360 YDRNAKRCKE KWENINKYFK RVKESNKKRP EDSKTCPYFQ QLDALYKEKS KKVANTTNNN 420 SANPNYELKP EELLMHMMGG QEECHQQPES ATDDGEPENA DQNQEDEREE DEEENEDEDY 480 QIVANNNSNQ MAVAS

Sequence ? help Back to Top

Protein Sequence Length: 495 aa Download sequence

MLENSASPEN SAAAAEEDAA GGSVGLAEEA DRSWAGNRWP REETMALLKV RSSMDTAFRD  60
ASLKAPLWEE VSRNLAELGY NRSAKKCKEK FENIYKYHKR TKDSRSGKAN GKNYRYFEQL  120
EALDNHPLLP SQADSMEEMP RIIPNNIVHN AIPCSVVNPG SNFVDTTTTS ISTSATSCSS  180
KESGGTMKKK RKFVEFFERL MNEVIEKQEK LQKKFVEALE KCEQERLARE EEWKMQELAR  240
IKKERERLNH ERSIAAAKDA AVLSFLKMFS EQVGAVQFPE SSILMEHFMD KQDDGNVDRN  300
TSNQENSNNG NSNQISSSRW PKEEIDALIQ LRTNLQMKYQ ENGPKGPLWE EISLAMKKLG  360
YDRNAKRCKE KWENINKYFK RVKESNKKRP EDSKTCPYFQ QLDALYKEKS KKVANTTNNN  420
SANPNYELKP EELLMHMMGG QEECHQQPES ATDDGEPENA DQNQEDEREE DEEENEDEDY  480
QIVANNNSNQ MAVAS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76880.1	5e-68	Trihelix family protein