PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022159067.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

SBP

Protein Properties

Length: 1015aa MW: 111843 Da PI: 6.1399

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022159067.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	131.9	2.3e-41	154	231	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqve+C adls+ak+yhrrhkvCe+hska+ +lv++++qrfCqqCsrfh l+efDe+krsCrrrLa+hn+rrrk ++ XP_022159067.1 154 VCQVEDCGADLSNAKDYHRRHKVCEMHSKASRALVANVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKINP 231 6**************************************************************************875 PP

Sequence ? help Back to Top
Protein Sequence Length: 1015 aa Download sequence
MEAGYEGEAC QLYGVGSMDL RAAVGKRSLE WDLNDWKWDG DLFIARPLNT MESDHLSRQL 60 FPIVSGIPLT GGSSNSSSSC SDEANMGIEK GKREVEKRRR VTVMEDENLN DEARALSLKV 120 GGNGSQIAER EAGNWEGTSG KKTKLSGGNS NRAVCQVEDC GADLSNAKDY HRRHKVCEMH 180 SKASRALVAN VMQRFCQQCS RFHVLQEFDE GKRSCRRRLA GHNKRRRKIN PDNVVNGNSP 240 PDEQTSSYLL ITLLRILANL HSNGSNQTTD QDLLAHLIRS LACQSSEHGG KNLSGILHDP 300 QNLLNNGALI GKSDLVSTFL SNGPQVPLRP SKQHDTVPIS EKPVQAIARG GDTPAISSIK 360 PSTSNSPPAY SEIRNSTVGQ CKMMNFDLND AYVDSDDGME DIERPALPAH MGTSSLECPS 420 WVQQDSHQSS PPQTSGNSDS ASAQSPSSSA GDAQSRTDRI ILKLFGKAPN DFPHVLRAQV 480 LDWLSHSPTE IESYIRPGCV ILTIYLRQTE AAWDDLCHDL STSLNRLLEV PDDSFWRTGW 540 VYVRVQHQIA FVYHGQVVVD TSLPLRNKNY CRITSINPVA VSASKKAIFS VKGINLTRPT 600 TRLLCAIEGK YLTQEASDES SESGDNLKTQ DDSECVTFSC SIPDVYGRGF IEVEDHGFSS 660 SSIPFIVAEE DVCSEICTLQ TALEFTETCS NSGEATEMEG RSSAMEFIHE IGWLFHRNQL 720 KSRLGHLDPN ENLFSLTRFK WLMEFSMDHD WCAVVKKLLD VVLDGTVDAG EHASLNLALT 780 EMSLLHRAVR KNSRSLVELL LRYPSRVNDA SSSEDNASVD VGTDSFLFRP DVIGPAGLTP 840 LHIAAGKDDS EDVLDALTND PGMVGVEAWK NARDSTGSTP EDYARLRGHY SYIRLVQRKI 900 NKRSAAGHVV LDIPSTLSDG SWNQKQNTDL TSSRFEIGRT DMKPTQLQHC RLCVRKPLGC 960 GASSSSASLV YRPAMLSMVA IAAVCVCVAL LFKSSPEVLY VFRPFRWELL DYGTS

Sequence ? help Back to Top

Protein Sequence Length: 1015 aa Download sequence

MEAGYEGEAC QLYGVGSMDL RAAVGKRSLE WDLNDWKWDG DLFIARPLNT MESDHLSRQL  60
FPIVSGIPLT GGSSNSSSSC SDEANMGIEK GKREVEKRRR VTVMEDENLN DEARALSLKV  120
GGNGSQIAER EAGNWEGTSG KKTKLSGGNS NRAVCQVEDC GADLSNAKDY HRRHKVCEMH  180
SKASRALVAN VMQRFCQQCS RFHVLQEFDE GKRSCRRRLA GHNKRRRKIN PDNVVNGNSP  240
PDEQTSSYLL ITLLRILANL HSNGSNQTTD QDLLAHLIRS LACQSSEHGG KNLSGILHDP  300
QNLLNNGALI GKSDLVSTFL SNGPQVPLRP SKQHDTVPIS EKPVQAIARG GDTPAISSIK  360
PSTSNSPPAY SEIRNSTVGQ CKMMNFDLND AYVDSDDGME DIERPALPAH MGTSSLECPS  420
WVQQDSHQSS PPQTSGNSDS ASAQSPSSSA GDAQSRTDRI ILKLFGKAPN DFPHVLRAQV  480
LDWLSHSPTE IESYIRPGCV ILTIYLRQTE AAWDDLCHDL STSLNRLLEV PDDSFWRTGW  540
VYVRVQHQIA FVYHGQVVVD TSLPLRNKNY CRITSINPVA VSASKKAIFS VKGINLTRPT  600
TRLLCAIEGK YLTQEASDES SESGDNLKTQ DDSECVTFSC SIPDVYGRGF IEVEDHGFSS  660
SSIPFIVAEE DVCSEICTLQ TALEFTETCS NSGEATEMEG RSSAMEFIHE IGWLFHRNQL  720
KSRLGHLDPN ENLFSLTRFK WLMEFSMDHD WCAVVKKLLD VVLDGTVDAG EHASLNLALT  780
EMSLLHRAVR KNSRSLVELL LRYPSRVNDA SSSEDNASVD VGTDSFLFRP DVIGPAGLTP  840
LHIAAGKDDS EDVLDALTND PGMVGVEAWK NARDSTGSTP EDYARLRGHY SYIRLVQRKI  900
NKRSAAGHVV LDIPSTLSDG SWNQKQNTDL TSSRFEIGRT DMKPTQLQHC RLCVRKPLGC  960
GASSSSASLV YRPAMLSMVA IAAVCVCVAL LFKSSPEVLY VFRPFRWELL DYGTS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	97	101	KRRRV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60030.1	0.0	SBP family protein