PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_022158719.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
|
||||||||
Family | Trihelix | ||||||||
Protein Properties | Length: 190aa MW: 21271.4 Da PI: 4.5288 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 37.9 | 4.7e-12 | 7 | 43 | 50 | 87 |
trihelix 50 Ckekwenlnkrykkikegekkrtsessstcpyfdqlea 87 ++kwen+nk++kk+k+++kkr +s+tcpyfd+l+a XP_022158719.1 7 IDKKWENINKYFKKVKDSNKKR-RHDSKTCPYFDELDA 43 679******************8.78889*******985 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 190 aa Download sequence |
MAENPKIDKK WENINKYFKK VKDSNKKRRH DSKTCPYFDE LDALYRSKII TIPDAPAIAT 60 ATASTTPSSP ILPIPQSQPH NTATADLSAS LFGEPTEEPA PTKPEDIVNE LMELQELYDD 120 EHHHPQRPHF VPQPGSNGDE EDDDDDYCSG GDDVPEGKRN SMDYKIEFQR RNVGNSNGVG 180 SEFPSMAVVQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G76880.1 | 1e-16 | Trihelix family protein |