PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022158437.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

Protein Properties

Length: 725aa MW: 80457.7 Da PI: 7.0187

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022158437.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	59.7	5.3e-19	191	290	1	98
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 f+kvl+ sd+++ grlvlpk +ae++ +++ e+ ++++d +g++W++++++ +++s++yvl+ G ++ +L++gD+v+F++++ +++ XP_022158437.1 191 FEKVLSASDAGRIGRLVLPKACAEAYfpPISQSEGLPVRIQDVKGNEWTFQFRFwpNNNSRMYVLE-GVTPCIQSMQLRAGDTVTFSRID-PGGQ 283 99************************555556677***********99899999999.*******************887.7777 PP .EEEEE- CS B3 92 lvvkvfr 98 lv+++++ XP_022158437.1 284 LVMGFRK 290 7777765 PP

Sequence ? help Back to Top
Protein Sequence Length: 725 aa Download sequence
MEASETDHFQ QPQRVDRIAS PVQNKRENFR SPFEEVGTSF FNMTKLSVKR QPPVGSIMYS 60 KLDTSRPLLE LKDMQESLSR PSLNMTLGVP SGAPNFVVPV SGSAAEEDEK SILPSFQQGQ 120 RSRPIFPKPL KTGATVNSEA RKGMVPMVRI ARPPAEGRGK NQLLPRYWPR ITDQELEQLA 180 GDLNSTIVPL FEKVLSASDA GRIGRLVLPK ACAEAYFPPI SQSEGLPVRI QDVKGNEWTF 240 QFRFWPNNNS RMYVLEGVTP CIQSMQLRAG DTVTFSRIDP GGQLVMGFRK ATNSTDMQDA 300 KISTVPNGSH SGDASYSGVF QNLPLRADGD ISLHNCENFG GKTNDASGQQ PMLPVEKKGA 360 RNIGSKNKRL LMHSEDALEL RLTWEEAQDL LRPPPSANPT IVTIDDHEFE EYDEPPVFGK 420 RTIFTVTSTG EQKQWAQCDD CSKWRRLPVD VLLPPKWTCS DNVWDLSRCT CSAPEEISTK 480 EQENLLRASK DFKKRKIMKS QKSTQDLEPS GLDALASAAV LGDSMVDLQE LGTTTRHPRH 540 RPGCTCIVCI QPPSGKGKHK STCTCNVCLT VKRRFKTLML RKKKRQSERE VETLLKDGNP 600 QFDVSGMSGT VRDTLLHTDH SENEGSQSRI KDREAAISSG QIDLNCHPDR EDMQLEVAGL 660 SMMSLVEAAS QPLDSYTKQI GVSSVTSEQQ SSQPSSAESE RRLSDEGCHG SGHESTSNGC 720 REEHH

Sequence ? help Back to Top

Protein Sequence Length: 725 aa Download sequence

MEASETDHFQ QPQRVDRIAS PVQNKRENFR SPFEEVGTSF FNMTKLSVKR QPPVGSIMYS  60
KLDTSRPLLE LKDMQESLSR PSLNMTLGVP SGAPNFVVPV SGSAAEEDEK SILPSFQQGQ  120
RSRPIFPKPL KTGATVNSEA RKGMVPMVRI ARPPAEGRGK NQLLPRYWPR ITDQELEQLA  180
GDLNSTIVPL FEKVLSASDA GRIGRLVLPK ACAEAYFPPI SQSEGLPVRI QDVKGNEWTF  240
QFRFWPNNNS RMYVLEGVTP CIQSMQLRAG DTVTFSRIDP GGQLVMGFRK ATNSTDMQDA  300
KISTVPNGSH SGDASYSGVF QNLPLRADGD ISLHNCENFG GKTNDASGQQ PMLPVEKKGA  360
RNIGSKNKRL LMHSEDALEL RLTWEEAQDL LRPPPSANPT IVTIDDHEFE EYDEPPVFGK  420
RTIFTVTSTG EQKQWAQCDD CSKWRRLPVD VLLPPKWTCS DNVWDLSRCT CSAPEEISTK  480
EQENLLRASK DFKKRKIMKS QKSTQDLEPS GLDALASAAV LGDSMVDLQE LGTTTRHPRH  540
RPGCTCIVCI QPPSGKGKHK STCTCNVCLT VKRRFKTLML RKKKRQSERE VETLLKDGNP  600
QFDVSGMSGT VRDTLLHTDH SENEGSQSRI KDREAAISSG QIDLNCHPDR EDMQLEVAGL  660
SMMSLVEAAS QPLDSYTKQI GVSSVTSEQQ SSQPSSAESE RRLSDEGCHG SGHESTSNGC  720
REEHH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	572	583	KRRFKTLMLRKK
2	572	585	KRRFKTLMLRKKKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G30470.1	0.0	B3 family protein