PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022158410.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | ERF | ||||||||
Protein Properties | Length: 228aa MW: 25312.5 Da PI: 4.4711 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61.3 | 2.2e-19 | 32 | 81 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++ GVr+++ +gr++AeIrdps+ + r++lg+f+taeeAa a+++a+++++g XP_022158410.1 32 RFLGVRRRP-WGRYAAEIRDPST---KERHWLGTFDTAEEAALAYDRAARSMRG 81 678******.**********965...5*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 228 aa Download sequence |
MDFTDSKTNS TSTSSKPRRK QQEQQQQQET TRFLGVRRRP WGRYAAEIRD PSTKERHWLG 60 TFDTAEEAAL AYDRAARSMR GSKARTNFVY SDMPHGSSIT SIISPDESAD AFPPPIPTPT 120 QNDQLSFALH DPFATSPFPG NNWLSNSDFD HDVDLPSNYQ PVTAFMDTGM PQADSTELPP 180 LPPDASSSYN EYAFMSYDSN AAVLPPFPDT PADGYGFGFG GSSSTYFY |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 16 | 21 | KPRRKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13910.1 | 2e-33 | ERF family protein |