PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022158241.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

Protein Properties

Length: 313aa MW: 36240.3 Da PI: 9.8247

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022158241.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	57.2	3e-18	20	112	1	99
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 ffkv +p + l+++ l +pkkf+++hg+ ++ ++ l+ +g +W+v + +k+ g+++++kGW++Fv+ + +g f++F+++ + +f +v+ XP_022158241.1 20 FFKVILP-HILTQRKLNVPKKFVSRHGEA-LQNEEVFLKVANGAEWKVGV--EKSNGKVWFEKGWQQFVEFYSIGVGYFLTFRYETNACF--HVT 108 6676655.5555666*********644.57789***********..****************************999999..* PP EE-S CS B3 96 vfrk 99 +f+ XP_022158241.1 109 IFDP 112 *986 PP
2	B3	56.1	6.7e-18	231	313	16	98
EE--HHH.HTT---..--SEEEEEETTS-EEEEEE.....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 16 lvlpkkfaeehggkkeesktltledesgrsWevkliy...rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 +pk+fa+ h k +s++++led++gr+W++ + + ++ +++ +++GWk F+++n L+eg ++vF+l++ ++ +++v++fr XP_022158241.1 231 PNIPKSFAKIHV-K--KSQEISLEDSDGRVWKIWCGVrpsQNVNKSVEMRGGWKAFARDNSLEEGHICVFELMKGTKLSFKVTIFR 313 67****6664.3..4679***********77454444445999*********************98899999999997 PP

Sequence ? help Back to Top
Protein Sequence Length: 313 aa Download sequence
MASSSRRHPH RGFTSATPHF FKVILPHILT QRKLNVPKKF VSRHGEALQN EEVFLKVANG 60 AEWKVGVEKS NGKVWFEKGW QQFVEFYSIG VGYFLTFRYE TNACFHVTIF DPSASEIEYP 120 MEDFGDIRSE SEEFEDQILV YKRRREGKIT QTNLYSVAHH KKMKISNDHD EVLRNEDFQS 180 SKFKDRLKVI KCENGLRSVT ERASTFQSMT PNHSFMITMG PSYIHTGKGD PNIPKSFAKI 240 HVKKSQEISL EDSDGRVWKI WCGVRPSQNV NKSVEMRGGW KAFARDNSLE EGHICVFELM 300 KGTKLSFKVT IFR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	143	164	RRREGKITQTNLYSVAHHKKMK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18990.1	2e-33	B3 family protein