PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022158235.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family B3
Protein Properties Length: 379aa    MW: 44835 Da    PI: 9.4181
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022158235.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B356.55.1e-1812103198
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     ffk+ ++ +  +   l lpkkf+ ++gg+   ++t +l+ +sg +Wev+l  +k++g++++++GW eFv+   +k g fvvF+++g+ +f  +v 
  XP_022158235.1  12 FFKIILHQNLIEG-KLELPKKFVMNNGGS-LLQRTASLRLPSGAKWEVEL--KKSDGKVWFGRGWPEFVEFYSVKLGYFVVFRYEGNCCF--NVV 100
                     6666666555555.5********888777.6778****************..**************************************..777 PP

                     EE- CS
              B3  96 vfr 98 
                     +f+
  XP_022158235.1 101 IFD 103
                     776 PP
2B365.48.3e-21277371196
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkl..iyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                     f  ++ ps+  + + l+lp++fae++  k  es++++le  +gr W+v +  ++  +++r+ l++GWk+F+ +n+L+egD++vF+l++rs+++ +
  XP_022158235.1 277 FMVTMRPSYIQTGNYLSLPRSFAERYL-K--ESVDVKLEAADGRIWSVWCgvRWAFTRRRTELKAGWKNFAVENDLQEGDICVFELINRSTTKVL 368
                     778999********************4.3..5899*************98667778888899*************************88776554 PP

                     EEE CS
              B3  94 vkv 96 
                     ++v
  XP_022158235.1 369 FRV 371
                     433 PP
Sequence ? help Back to Top
Protein Sequence    Length: 379 aa     Download sequence    
MASFFTSETP HFFKIILHQN LIEGKLELPK KFVMNNGGSL LQRTASLRLP SGAKWEVELK  60
KSDGKVWFGR GWPEFVEFYS VKLGYFVVFR YEGNCCFNVV IFDLSATEMD YPVPLKRIFN  120
RRNRGFDRRQ PLLVPKIEDE EDDDDDGSVR MLNGVSRKRM RERDQEAPVY CSLRKMKKMM  180
RQTVKIKRRF TTPQRFNDDG DEEEEEDEEE EEEDLEMNYS RRQNNYRASN HRSGGRFSPE  240
SMRPEQPPRI PQPLTENQER LLRRASAFKF ATRNPSFMVT MRPSYIQTGN YLSLPRSFAE  300
RYLKESVDVK LEAADGRIWS VWCGVRWAFT RRRTELKAGW KNFAVENDLQ EGDICVFELI  360
NRSTTKVLFR VTIFRRPDN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1157163RKRMRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.13e-24B3 family protein