PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022157959.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family MIKC_MADS
Protein Properties Length: 237aa    MW: 27112.1 Da    PI: 10.0051
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022157959.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF87.48.2e-281059251
                    ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    ri+n++ rqvtfskRrng+lKKA+EL +LCdaev viifsst klyeyss
  XP_022157959.1 10 RIDNSTSRQVTFSKRRNGLLKKAKELAILCDAEVGVIIFSSTSKLYEYSS 59
                    8***********************************************96 PP

2K-box86.55.4e-2980170898
           K-box   8 sleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 
                       ++++ +++q+e+a L++++++L +++R+++Ge+L+ Ls+k+Lq+Le+qLe sl+ +R kK+++l+++i+el +k + ++++n++L kk+
  XP_022157959.1  80 GISTSEVKYWQREAAMLRQQLQSLHENHRQMMGEELTGLSVKDLQNLENQLEISLRGVRMKKDQILMDEIQELNRKGNLIHQDNMELYKKV 170
                     378999**********************************************************************************998 PP

Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MGRGKIVIRR IDNSTSRQVT FSKRRNGLLK KAKELAILCD AEVGVIIFSS TSKLYEYSST  60
SMKTLIERYN KTKEEQHQLG ISTSEVKYWQ REAAMLRQQL QSLHENHRQM MGEELTGLSV  120
KDLQNLENQL EISLRGVRMK KDQILMDEIQ ELNRKGNLIH QDNMELYKKV NLIHQENLEL  180
YKKVYGTKGA NGAHTSSLTN GLGVGEEADI PINLQLSQPQ NHKAPERATK LGRLQLP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57230.11e-107MIKC_MADS family protein