PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022157959.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 237aa MW: 27112.1 Da PI: 10.0051 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 87.4 | 8.2e-28 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 ri+n++ rqvtfskRrng+lKKA+EL +LCdaev viifsst klyeyss XP_022157959.1 10 RIDNSTSRQVTFSKRRNGLLKKAKELAILCDAEVGVIIFSSTSKLYEYSS 59 8***********************************************96 PP | |||||||
2 | K-box | 86.5 | 5.4e-29 | 80 | 170 | 8 | 98 |
K-box 8 sleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 ++++ +++q+e+a L++++++L +++R+++Ge+L+ Ls+k+Lq+Le+qLe sl+ +R kK+++l+++i+el +k + ++++n++L kk+ XP_022157959.1 80 GISTSEVKYWQREAAMLRQQLQSLHENHRQMMGEELTGLSVKDLQNLENQLEISLRGVRMKKDQILMDEIQELNRKGNLIHQDNMELYKKV 170 378999**********************************************************************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 237 aa Download sequence |
MGRGKIVIRR IDNSTSRQVT FSKRRNGLLK KAKELAILCD AEVGVIIFSS TSKLYEYSST 60 SMKTLIERYN KTKEEQHQLG ISTSEVKYWQ REAAMLRQQL QSLHENHRQM MGEELTGLSV 120 KDLQNLENQL EISLRGVRMK KDQILMDEIQ ELNRKGNLIH QDNMELYKKV NLIHQENLEL 180 YKKVYGTKGA NGAHTSSLTN GLGVGEEADI PINLQLSQPQ NHKAPERATK LGRLQLP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G57230.1 | 1e-107 | MIKC_MADS family protein |