PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022157765.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family HSF
Protein Properties Length: 340aa    MW: 37224.4 Da    PI: 4.4833
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022157765.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind112.23.4e-35251152101
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 
                     Fl+k++++++d+++++lisw+e+g++f+v+ + efa+++LpkyFkh+nf+SFvRQLn+YgF+kv  ++         weF+++ F++g+k ll++
  XP_022157765.1  25 FLTKTFQLVDDPAVDDLISWNEDGSTFIVWRPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDR---------WEFANDCFRRGEKGLLRD 110
                     9*****************************************************************99.........****************** PP

                     XXXXX CS
    HSF_DNA-bind  97 ikrkk 101
                     i+r+k
  XP_022157765.1 111 IQRRK 115
                     ***98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    
MSPSPAEPIG ESGTGDSQRS IPTPFLTKTF QLVDDPAVDD LISWNEDGST FIVWRPAEFA  60
RDLLPKYFKH NNFSSFVRQL NTYGFRKVVP DRWEFANDCF RRGEKGLLRD IQRRKVALSV  120
ATTPPTPAAM VSPVTVAAAP AVAHVISPAN SGEEQVTSSN SSPMAFQRGT SCTTTPELLR  180
ENERLRKENM QLSHELTQLK GLCNNILSLM TNYASGHQSE SVSVRDGKAL ELMPATQVMM  240
EDEGAVSDGI QELRLKVEEA TTAAAAAAEG VTPKLFGVSI GVKRVRREEE EEEEEMVGQN  300
HVQSEEGENG SEIKAEPLDE NSDNPEGSAS QWLELGNQGS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11660.12e-91HSF family protein