PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022157280.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

Protein Properties

Length: 817aa MW: 90775.1 Da PI: 6.2617

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022157280.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	55.4	1.2e-17	239	338	1	98
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 f+k l+ sd+++ grlv+pk +ae++ ++++e+ ++++d +g++W +++++ +++s++yvl+ G ++ +L++gD+v+F++++ e++ XP_022157280.1 239 FEKMLSASDAGRIGRLVVPKACAEAYfpPISQPEGLPIRIQDVKGKEWVFQFRFwpNNNSRMYVLE-GVTPCIQSMQLQAGDTVTFSRMD-PEGK 331 89************************555566778***********99899999999.*******************876.7777 PP .EEEEE- CS B3 92 lvvkvfr 98 l +++++ XP_022157280.1 332 LIMGFRK 338 7777766 PP

Sequence ? help Back to Top
Protein Sequence Length: 817 aa Download sequence
MELHDSGGVS CISCAKVLGL HTTGTGEKLN GLSTSQVQNS GELQSFLVED GNADRMRFIQ 60 PGNKTEVNEL RQSLLSQSNN KNGSLVQMKR EENFPPAKDV GYLCSLEFNQ VTNGLDEATK 120 QEICKADSGT KFTYDSLALG CGNSNPLPGV SIDDKEDSKS SSPLLLGSRS RHLIPKPARS 180 VFNIGLEPNA SMVSQVRVAR PPAEGRGRNQ LLPRYWPRIT DQELQQISGA SNSTVVPLFE 240 KMLSASDAGR IGRLVVPKAC AEAYFPPISQ PEGLPIRIQD VKGKEWVFQF RFWPNNNSRM 300 YVLEGVTPCI QSMQLQAGDT VTFSRMDPEG KLIMGFRKAS SSSIMQDTHP TALSTGGHSS 360 EFFSSFFENL PILSGHSSLL QSLKGNMDPQ LNLLPGYFNQ PGADMSWQKA EKHDDNSREG 420 LLLSSMLVPE RKRTRNIGSK SKRLLIDCQD ALELKLTWEE VQDLLRPPPT VKPSKFMVED 480 HEFEEYEEPP VFGKRSIFVV RSTWGQEQWA QCDDCSKWRR LPVDVLLPSK WTCVENIWDQ 540 SRSSCSTPEE LTTRELENLL RLNKEFKRQR TLAFNRPIQD HESSGLDALA NAATLGDNVS 600 DPGAASVATT TKHPRHRPGC SCIVCIQPPS GKGKHKPTCT CNVCMTVKRR FKTLMMRKKK 660 RQSEREAEIA QKNQLKWGSK DETELDNTSR HVSLNLGPSE NETQLTNDSR SQSNLVETGK 720 DQLDLNCHPD QENEIKGVSN RVSMMSLVQI ASLPLETYLK QNGLTSLLSE PQVSSASHVP 780 AQGANEVEGA LNDDGCFAST AQDQESEEEE NREKDQS

Sequence ? help Back to Top

Protein Sequence Length: 817 aa Download sequence

MELHDSGGVS CISCAKVLGL HTTGTGEKLN GLSTSQVQNS GELQSFLVED GNADRMRFIQ  60
PGNKTEVNEL RQSLLSQSNN KNGSLVQMKR EENFPPAKDV GYLCSLEFNQ VTNGLDEATK  120
QEICKADSGT KFTYDSLALG CGNSNPLPGV SIDDKEDSKS SSPLLLGSRS RHLIPKPARS  180
VFNIGLEPNA SMVSQVRVAR PPAEGRGRNQ LLPRYWPRIT DQELQQISGA SNSTVVPLFE  240
KMLSASDAGR IGRLVVPKAC AEAYFPPISQ PEGLPIRIQD VKGKEWVFQF RFWPNNNSRM  300
YVLEGVTPCI QSMQLQAGDT VTFSRMDPEG KLIMGFRKAS SSSIMQDTHP TALSTGGHSS  360
EFFSSFFENL PILSGHSSLL QSLKGNMDPQ LNLLPGYFNQ PGADMSWQKA EKHDDNSREG  420
LLLSSMLVPE RKRTRNIGSK SKRLLIDCQD ALELKLTWEE VQDLLRPPPT VKPSKFMVED  480
HEFEEYEEPP VFGKRSIFVV RSTWGQEQWA QCDDCSKWRR LPVDVLLPSK WTCVENIWDQ  540
SRSSCSTPEE LTTRELENLL RLNKEFKRQR TLAFNRPIQD HESSGLDALA NAATLGDNVS  600
DPGAASVATT TKHPRHRPGC SCIVCIQPPS GKGKHKPTCT CNVCMTVKRR FKTLMMRKKK  660
RQSEREAEIA QKNQLKWGSK DETELDNTSR HVSLNLGPSE NETQLTNDSR SQSNLVETGK  720
DQLDLNCHPD QENEIKGVSN RVSMMSLVQI ASLPLETYLK QNGLTSLLSE PQVSSASHVP  780
AQGANEVEGA LNDDGCFAST AQDQESEEEE NREKDQS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	648	659	KRRFKTLMMRKK
2	648	661	KRRFKTLMMRKKKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32010.1	0.0	B3 family protein