PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022157049.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

NAC

Protein Properties

Length: 416aa MW: 46740.1 Da PI: 5.3008

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022157049.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	107.3	1.9e-33	58	197	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.....lelee.vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk.....sgyW 83 lp+G++F+P+d+e++ + L+k g++ ++++ +++e +i++++P++Lp vk++ + +fF+++ k+y+tg+rk+r+++ + +W XP_022157049.1 58 LPRGVKFDPSDQEIILHLLAKVGIGEPkphpfINEFIpTVSEDdGICYTHPQKLP-DVKKDGSTSHFFHRAIKAYNTGTRKRRKINdadfgDVRW 151 799**********887777766666776552222222444436******.778888999***************86555555788 PP NAM 84 katgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 ++tgk+k+v+ +g + g+kk++v+y + + k+ekt+Wvmh+y+l XP_022157049.1 152 HKTGKTKPVML-DGVQRGCKKIMVLYmsSVKGGKSEKTNWVMHQYHL 197 *********.99********6545777888*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 416 aa Download sequence
MAGSSWLVDG NRFATKIKSA SGTTNPGRLE WESNPTRPCP SCQHLIDNSD VAQMWPGLPR 60 GVKFDPSDQE IILHLLAKVG IGEPKPHPFI NEFIPTVSED DGICYTHPQK LPDVKKDGST 120 SHFFHRAIKA YNTGTRKRRK INDADFGDVR WHKTGKTKPV MLDGVQRGCK KIMVLYMSSV 180 KGGKSEKTNW VMHQYHLGMD EAEKDGEYVI SKIYYQQQQQ MNISDQSYQD IPEGNDAGTI 240 KIDPVTPKSV TPGPPRMEGK NYVIFDRGQN VAWIDHLDQH AEAGFANNIP TEYDNMDHSE 300 QVKEEDHNGE KVKWWDGESQ DLLDSQQLVE ALSLCDDLLQ SQSPKNANNG HGASNSKAIL 360 LDYANLGSEH LKKDLEACQN YVLNPMHIEL DTPPDFRLSE LEFESEDSYL AWGGTG

Sequence ? help Back to Top

Protein Sequence Length: 416 aa Download sequence

MAGSSWLVDG NRFATKIKSA SGTTNPGRLE WESNPTRPCP SCQHLIDNSD VAQMWPGLPR  60
GVKFDPSDQE IILHLLAKVG IGEPKPHPFI NEFIPTVSED DGICYTHPQK LPDVKKDGST  120
SHFFHRAIKA YNTGTRKRRK INDADFGDVR WHKTGKTKPV MLDGVQRGCK KIMVLYMSSV  180
KGGKSEKTNW VMHQYHLGMD EAEKDGEYVI SKIYYQQQQQ MNISDQSYQD IPEGNDAGTI  240
KIDPVTPKSV TPGPPRMEGK NYVIFDRGQN VAWIDHLDQH AEAGFANNIP TEYDNMDHSE  300
QVKEEDHNGE KVKWWDGESQ DLLDSQQLVE ALSLCDDLLQ SQSPKNANNG HGASNSKAIL  360
LDYANLGSEH LKKDLEACQN YVLNPMHIEL DTPPDFRLSE LEFESEDSYL AWGGTG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25580.1	1e-145	NAC family protein