PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022156983.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MYB_related

Protein Properties

Length: 735aa MW: 80589.4 Da PI: 6.6894

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022156983.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.6	4.4e-16	24	68	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r rWT+eE+ ++++a k++G W +I +++g ++t+ q++s+ qk+ XP_022156983.1 24 RERWTEEEHNRFLEALKLYGRA-WQRIEEHIG-TKTAVQIRSHAQKF 68 78****************88.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 735 aa Download sequence
MDPNSSGEDL VFKTRKPYTI TKQRERWTEE EHNRFLEALK LYGRAWQRIE EHIGTKTAVQ 60 IRSHAQKFFS KLEKEALVKG IPVGQALDID IPPPRPKRKP SNPYPRKTPI SKLGSNDGKL 120 LTLVFSSQSK QILDLEKEPL NEGTSGEEQA TNEKDAHDDN CSEVLTLSRE AYSFSSKNKS 180 SVPVQVKLKH SCGFREFLPS VKELLHEKVT SKVSELEISS ASHEKLVSAE KKEALSCVLS 240 RDEMQAAHNY PRHVPVHVVD GSLGANAQGS LTDTPLLDST FHPVTEVPGE RGILRNPSDS 300 VSFEHQNNTP RCIYQSYPPI HPTPFTLLHP DQENCKSLHH MSSSFSDLIV STLQQNPAAH 360 AIASLTATCW PYVNSETSED SPLSDKEGLR TKQMNPTPSM EAVAAATVAA ATAWWAAHGL 420 LPLCAPFHST FTNAAISAPV VQSSDICPNP ASKDKAESPL QNAALQDQHL DAEQSEALTA 480 QHSGSKSPTH SSSDSEGSGG ANANAMVKPA HNEKTPAVAE FHDSNKVKRG KQVDRSSCGS 540 NTPSGSDREI DASEKNDKEK EEETELEMNR PAAESSNRRS RSISNTSESW KEVSDEVKRG 600 RLAFQALFTR DVLPQSFSPP HDVENENKEN ENVKKDSHVV DKDSGAAVLD LNNKTCGSSN 660 HQGMERDTSP TGVNNGVGEF LTIGLGTGTP KSCRTGFKPY KRCSVEAKEK RMTTSSSHCE 720 EGGQKRLRLE QKASN

Sequence ? help Back to Top

Protein Sequence Length: 735 aa Download sequence

MDPNSSGEDL VFKTRKPYTI TKQRERWTEE EHNRFLEALK LYGRAWQRIE EHIGTKTAVQ  60
IRSHAQKFFS KLEKEALVKG IPVGQALDID IPPPRPKRKP SNPYPRKTPI SKLGSNDGKL  120
LTLVFSSQSK QILDLEKEPL NEGTSGEEQA TNEKDAHDDN CSEVLTLSRE AYSFSSKNKS  180
SVPVQVKLKH SCGFREFLPS VKELLHEKVT SKVSELEISS ASHEKLVSAE KKEALSCVLS  240
RDEMQAAHNY PRHVPVHVVD GSLGANAQGS LTDTPLLDST FHPVTEVPGE RGILRNPSDS  300
VSFEHQNNTP RCIYQSYPPI HPTPFTLLHP DQENCKSLHH MSSSFSDLIV STLQQNPAAH  360
AIASLTATCW PYVNSETSED SPLSDKEGLR TKQMNPTPSM EAVAAATVAA ATAWWAAHGL  420
LPLCAPFHST FTNAAISAPV VQSSDICPNP ASKDKAESPL QNAALQDQHL DAEQSEALTA  480
QHSGSKSPTH SSSDSEGSGG ANANAMVKPA HNEKTPAVAE FHDSNKVKRG KQVDRSSCGS  540
NTPSGSDREI DASEKNDKEK EEETELEMNR PAAESSNRRS RSISNTSESW KEVSDEVKRG  600
RLAFQALFTR DVLPQSFSPP HDVENENKEN ENVKKDSHVV DKDSGAAVLD LNNKTCGSSN  660
HQGMERDTSP TGVNNGVGEF LTIGLGTGTP KSCRTGFKPY KRCSVEAKEK RMTTSSSHCE  720
EGGQKRLRLE QKASN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01060.3	1e-101	MYB_related family protein