PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022156884.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family MYB
Protein Properties Length: 289aa    MW: 33003.9 Da    PI: 9.1242
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022156884.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding25.23.9e-082469346
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46
                     +WT+eE +++  a + + ++   +W ++a++++ g++  +++  ++ 
   XP_022156884.1 24 KWTKEENKRFESALAIYDKEtpdRWLKVAAMIP-GKSVGDVIKQYRE 69
                     8*****************99*************.******9999986 PP
2Myb_DNA-binding452.5e-14125169347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+++++++  ++G+g+W+ I+r + + +t+ q+ s+ qky
   XP_022156884.1 125 PWTEEEHKQFLRGLMKYGKGDWRNISRNFVNSKTPTQVASHAQKY 169
                      8*****************************9*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    
METLYPSSHL SSSAWFVLDN PSTKWTKEEN KRFESALAIY DKETPDRWLK VAAMIPGKSV  60
GDVIKQYREL EEDVSEIEAG RFPIAGYDFA SSFSFEFVDD RNFDSCRRKS SVGRGSDQER  120
KKGVPWTEEE HKQFLRGLMK YGKGDWRNIS RNFVNSKTPT QVASHAQKYF MRQLSGGKDK  180
RRPSIHDITT VNLTESAIVL DQPSKQLPSL QKSHCYQKLL LDWNRSSDGG LLGLGPNYGD  240
RLVSFPSGIA ANGTKTEQDR ELNDVYYGAY SKPHKSMFQF ESSRHQIYG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G05790.12e-89MYB family protein