PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022156831.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family AP2
Protein Properties Length: 427aa    MW: 46884.4 Da    PI: 8.7882
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022156831.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.14e-1769128155
             AP2   1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     s y+GV++++++gr++A+++d  ++n+   k+ k+++lg ++ +e Aa+a++ a++k++g
  XP_022156831.1  69 SIYRGVTRHRWTGRYEAHLWDkSTWNQnqnKKgKQVYLGAYDEEEAAARAYDLAALKYWG 128
                     57*******************766644468557*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 427 aa     Download sequence    
MASSSSDHAL KHEAGAGAGG AVGESSEVVI ANDQLLLYRG LKKAKKERGC TAKERISKMP  60
PCAAGKRSSI YRGVTRHRWT GRYEAHLWDK STWNQNQNKK GKQVYLGAYD EEEAAARAYD  120
LAALKYWGPG TLINFPVTDY ARDLEEMQNV SREEYLASLR RKSSGFSRGI SKYRGLSSRW  180
ESSFGRMPGP DYINSINYGA GDDQATESEF VHSFCIERKI DLTSYIKWWG SNKTRTANPG  240
SKSSDEDKHS CAGEVGSELK ALGQTARPTE PYEMPCLGTL QGVKKAASKV SALSILSRSA  300
AYKSLHEKAL KLQEINNEND ENENKNTVNK IDHGKGVETH KSHGSDPGER YGVALGMSGA  360
LPLQRNMFPL TPFLTAPLLS SYNTVDPLGD PIHWTSLASV LPTGLSGAPE VTKTETSSTY  420
TLFRPEE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41710.11e-153AP2 family protein