PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022156526.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

SBP

Protein Properties

Length: 343aa MW: 38222.8 Da PI: 7.9575

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022156526.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	129.3	1.4e-40	60	137	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +C v+gC++dl+++k+yhrrh+vC+ hsk+pvv+v+g+e+rfCqqCsrfh+l efDe krsCr+rL++hn+rrrk+q+ XP_022156526.1 60 TCLVDGCDSDLKNCKDYHRRHRVCDSHSKTPVVMVRGEEKRFCQQCSRFHSLGEFDEVKRSCRKRLDGHNRRRRKPQP 137 5**************************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 343 aa Download sequence
MDWGLGKFSG EKSAFRESKQ TPPPPPSFSD SIGSNNEESS SSSHGSSKRT RVLHGTQNQT 60 CLVDGCDSDL KNCKDYHRRH RVCDSHSKTP VVMVRGEEKR FCQQCSRFHS LGEFDEVKRS 120 CRKRLDGHNR RRRKPQPESL IFSSRDFLSN CKGPVLLHFS DPAVYGPDIG KTLWPVRSEE 180 KMKSMVPSNS FNYGGENKQL PFFLQRNGTK QGKQMGSSQL FFNQQLPDTI SLGSEVGSQK 240 ILPTNLSPED SGCALYLLSS HPVQALPDSG LSSLVQSHLG IPVQTQDTEL LHFSSLSDFS 300 GSFGSKDKPV CKTSLHGELV LEMEESDGLF HSEAPHKFPI SWE

Sequence ? help Back to Top

Protein Sequence Length: 343 aa Download sequence

MDWGLGKFSG EKSAFRESKQ TPPPPPSFSD SIGSNNEESS SSSHGSSKRT RVLHGTQNQT  60
CLVDGCDSDL KNCKDYHRRH RVCDSHSKTP VVMVRGEEKR FCQQCSRFHS LGEFDEVKRS  120
CRKRLDGHNR RRRKPQPESL IFSSRDFLSN CKGPVLLHFS DPAVYGPDIG KTLWPVRSEE  180
KMKSMVPSNS FNYGGENKQL PFFLQRNGTK QGKQMGSSQL FFNQQLPDTI SLGSEVGSQK  240
ILPTNLSPED SGCALYLLSS HPVQALPDSG LSSLVQSHLG IPVQTQDTEL LHFSSLSDFS  300
GSFGSKDKPV CKTSLHGELV LEMEESDGLF HSEAPHKFPI SWE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	118	135	KRSCRKRLDGHNRRRRKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G50670.1	3e-45	SBP family protein