PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022156468.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family NAC
Protein Properties Length: 320aa    MW: 37186 Da    PI: 7.24
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022156468.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM180.15.8e-5671361129
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 
                     +ppGfrFhPtdeelv++yL+kkv++k+++l ++ik+v++yk+ePwdL++  k+ + +++ewyfFs++dkky+tg+r+nratk+g+Wkatg+dk++
  XP_022156468.1   7 VPPGFRFHPTDEELVDYYLRKKVASKRIDL-DIIKDVNLYKIEPWDLQElcKLGSeDQNEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAI 100
                     69****************************.99**************954544442556************************************ PP

             NAM  93 lskkgelvglkktLvfykgrapkgektdWvmheyrle 129
                     +s ++ lvg++ktLvfykgrap+g+k+dW+mheyrle
  XP_022156468.1 101 YS-RHCLVGMRKTLVFYKGRAPNGQKSDWIMHEYRLE 136
                     **.999*****************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    
MNCIPHVPPG FRFHPTDEEL VDYYLRKKVA SKRIDLDIIK DVNLYKIEPW DLQELCKLGS  60
EDQNEWYFFS HKDKKYPTGT RTNRATKAGF WKATGRDKAI YSRHCLVGMR KTLVFYKGRA  120
PNGQKSDWIM HEYRLETNEN ATPQEEGWVV CRVFKKRLPT VRKAGDYGSP CWYDDQVSFM  180
PELDSPTTQI SHHQPYPSFH HPNYPCKQEL ELHYHAPPHD PMFLQLPHLE SPKMQPSSAA  240
NSLLPYAYAE QAVADHVTDW RVMEKFVASQ LSNDQDHVKP SNYSQASVFQ LPHECERKDM  300
APEFALAASP PSSCQVDLWK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12260.11e-143NAC family protein