PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022156353.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family MYB
Protein Properties Length: 303aa    MW: 34100.3 Da    PI: 8.2436
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022156353.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding58.91.2e-181461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g W++eEde+l+++++++G g+W+++++  g+ R++k+c++rw +yl
   XP_022156353.1 14 KGLWSPEEDEKLLNYITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYL 61
                     678*******************************************97 PP
2Myb_DNA-binding44.14.7e-1467110146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg+++++E++l+++++  lG++ W+ Ia  ++ gRt++++k+ w++
   XP_022156353.1  67 RGPFSQQEEDLIIELHSVLGNR-WSQIAVQLP-GRTDNEIKNLWNS 110
                      89********************.*********.*********9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    
MGRHSCCYKQ KLRKGLWSPE EDEKLLNYIT KHGHGCWSSV PKLAGLQRCG KSCRLRWINY  60
LRPDLKRGPF SQQEEDLIIE LHSVLGNRWS QIAVQLPGRT DNEIKNLWNS CIKKKLKQKG  120
IDPNTHKPLS NLQIDNDNNN TIQSNDQKNH ENKASPIEVV PNNTTATTAT STKPIESSDM  180
SSSSCNFSFH QVNDGSDHMG GLPIIPNSSN ATPFEAISSL FFPTPNSCAA HPRVRPSFSV  240
VPSENPPVGA HNTTNSAFLW QPDELLQTAS DLMMRNDWPH HQINHRQHIT TLQTELLGQQ  300
TFP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G57560.19e-88MYB family protein