PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022155908.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

G2-like

Protein Properties

Length: 389aa MW: 41889 Da PI: 8.9311

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022155908.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	107.3	8.1e-34	42	96	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprl+Wtp+LH+rFveav+qLGG++kAtPkt++++m+++gLtl+h+kSHLQkYRl XP_022155908.1 42 KPRLKWTPDLHDRFVEAVNQLGGADKATPKTVMKIMGIPGLTLYHLKSHLQKYRL 96 79****************************************************8 PP
2	Myb_DNA-binding	63.1	5.5e-20	44	95	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r++WT+++++++v+av+qlGg t+kt+++ mg g+tl+++ks++qky+ XP_022155908.1 44 RLKWTPDLHDRFVEAVNQLGGAdkaTPKTVMKIMGiPGLTLYHLKSHLQKYR 95 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 389 aa Download sequence
MYHHQHRPGA GKSMQSSERH LFLQGGNGPG GDSGLVLSTD AKPRLKWTPD LHDRFVEAVN 60 QLGGADKATP KTVMKIMGIP GLTLYHLKSH LQKYRLSKNL QGQANGGNGS NKTGMGWRVG 120 SVAVSGDQRL AEPNGPTRTT TNILVAPHSN NKSLQISETI QMQIEVQKRL HEQLEVQRHL 180 QLRIEAQGKY LQTVLEKAQE TLGRQNLGTV GLEAAKVQLS ELVSKVSTQC LTAAFPELHQ 240 GQGQAQRLGP QQTQPQDCSM DSCLTSCEGT SSKDQDQLLL HTSHLALRPY NVPAPGPASL 300 LASTAGDNHH GGLSMSIGGV LQGEKGDGYN GRMLNNSSKR KEVGAGAERY RMAAVAPSSL 360 DLNAGDDQLS NNDHVSSTNC KMFDLNGFS

Sequence ? help Back to Top

Protein Sequence Length: 389 aa Download sequence

MYHHQHRPGA GKSMQSSERH LFLQGGNGPG GDSGLVLSTD AKPRLKWTPD LHDRFVEAVN  60
QLGGADKATP KTVMKIMGIP GLTLYHLKSH LQKYRLSKNL QGQANGGNGS NKTGMGWRVG  120
SVAVSGDQRL AEPNGPTRTT TNILVAPHSN NKSLQISETI QMQIEVQKRL HEQLEVQRHL  180
QLRIEAQGKY LQTVLEKAQE TLGRQNLGTV GLEAAKVQLS ELVSKVSTQC LTAAFPELHQ  240
GQGQAQRLGP QQTQPQDCSM DSCLTSCEGT SSKDQDQLLL HTSHLALRPY NVPAPGPASL  300
LASTAGDNHH GGLSMSIGGV LQGEKGDGYN GRMLNNSSKR KEVGAGAERY RMAAVAPSSL  360
DLNAGDDQLS NNDHVSSTNC KMFDLNGFS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04030.3	1e-108	G2-like family protein