PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022155745.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

ARR-B

Protein Properties

Length: 551aa MW: 62523.4 Da PI: 7.7854

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022155745.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	70.6	2.3e-22	212	265	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k++++Wt L rF++av+ + G ++A+Pk+ile+m+v+gLt+e+v+SHLQkYR+ XP_022155745.1 212 KAKVVWTDFLQYRFLQAVHYI-GLDRAVPKKILEIMNVPGLTRENVASHLQKYRI 265 6799***************.******************************6 PP
2	Myb_DNA-binding	24.6	5.8e-08	215	264	2	48
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT ++ ++++av+ G + +k+I + m+ g+t++++ s++qky+ XP_022155745.1 215 VVWTDFLQYRFLQAVHYIGLDraVPKKILEIMNvPGLTRENVASHLQKYR 264 67***********************************************7 PP
3	Response_reg	72.1	2.3e-24	24	132	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 v++vdD+ + + ++ +l+ +y ev+ + d+ al +l++ + +Dl+++D+ mp+mdG+el+++ + e klp+i+++ + e+ +l+a++ G XP_022155745.1 24 VMLVDDDATSLAVVSGLLKTLNY-EVTPFNDPICALYTLRTGKqiFDLVITDLYMPNMDGFELTRRVNDEF-KLPVIMISIDDRESIMLKAIQEG 116 89*******************.***********999999******************9999.9****************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 + +l Kpf +++l++ XP_022155745.1 117 VVLYLLKPFTINDLRN 132 ***********987 PP

Sequence ? help Back to Top
Protein Sequence Length: 551 aa Download sequence
MSCHHQQVAA NNILLTAPPV RIHVMLVDDD ATSLAVVSGL LKTLNYEVTP FNDPICALYT 60 LRTGKQIFDL VITDLYMPNM DGFELTRRVN DEFKLPVIMI SIDDRESIML KAIQEGVVLY 120 LLKPFTINDL RNIWQFALST KSRSKPNPNL FIEETGSHGP RFPAFKSRSE EVNSVSSSNE 180 RRRGKKKKDS KGKGKNQEKA NDKKELTTTT KKAKVVWTDF LQYRFLQAVH YIGLDRAVPK 240 KILEIMNVPG LTRENVASHL QKYRIFLRKV AERCMVTSDK TIEEVLWSKF LSRHATLVLE 300 KIQKKRTRHL NSAQNPNIPP LLGNLNSNDN YDDHQSRYRP TSYPTNLLPF NLDHIRSFIG 360 GNKALQRNPN KAQSVNFEDR SYPSLPSFLN NDNYTGFSVR ASGELQVAQK GVSMGFEDYS 420 REYGQNGIGF GGDHESYNWG LMSNYGVNFG ENSQTVKHYS SHSLDNKDGG QEDSGFLAPL 480 FPMQSFVDNI NPTPNYQQQG NGSFMVDESH HAYNIYTADE ETSTTDPFSI DEKVLDEFMA 540 SLLRNDTSTE G

Sequence ? help Back to Top

Protein Sequence Length: 551 aa Download sequence

MSCHHQQVAA NNILLTAPPV RIHVMLVDDD ATSLAVVSGL LKTLNYEVTP FNDPICALYT  60
LRTGKQIFDL VITDLYMPNM DGFELTRRVN DEFKLPVIMI SIDDRESIML KAIQEGVVLY  120
LLKPFTINDL RNIWQFALST KSRSKPNPNL FIEETGSHGP RFPAFKSRSE EVNSVSSSNE  180
RRRGKKKKDS KGKGKNQEKA NDKKELTTTT KKAKVVWTDF LQYRFLQAVH YIGLDRAVPK  240
KILEIMNVPG LTRENVASHL QKYRIFLRKV AERCMVTSDK TIEEVLWSKF LSRHATLVLE  300
KIQKKRTRHL NSAQNPNIPP LLGNLNSNDN YDDHQSRYRP TSYPTNLLPF NLDHIRSFIG  360
GNKALQRNPN KAQSVNFEDR SYPSLPSFLN NDNYTGFSVR ASGELQVAQK GVSMGFEDYS  420
REYGQNGIGF GGDHESYNWG LMSNYGVNFG ENSQTVKHYS SHSLDNKDGG QEDSGFLAPL  480
FPMQSFVDNI NPTPNYQQQG NGSFMVDESH HAYNIYTADE ETSTTDPFSI DEKVLDEFMA  540
SLLRNDTSTE G

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	182	189	RRGKKKKD
2	183	189	RGKKKKD
3	185	214	KKKKDSKGKGKNQEKANDKKELTTTTKKAK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G16857.1	7e-49	ARR-B family protein