PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022155561.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family bHLH
Protein Properties Length: 265aa    MW: 29214.7 Da    PI: 6.2389
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022155561.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.53.2e-10148189955
                     HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +r+RR ri +++e L+ellP++      K + a++L  +++++k+Lq
  XP_022155561.1 148 DRQRRIRIAERLEALQELLPQS-----SKGNQASVLDDVIDHVKHLQ 189
                     7********************8.....6******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    
MEGQNGCNNS VQILSVKLGA NVNIVSRVPG DCTNHHHVLP ADRSVNQTNF PLLTEWTQNV  60
KTTPTFVEFI AETSNFSRKA STKEMLANVP FSTIEAVDGV SEIHGEFSYN HPTGSDSSKP  120
TDSRKNKAPG ILSKPRSSSS SRRGYSTDRQ RRIRIAERLE ALQELLPQSS KGNQASVLDD  180
VIDHVKHLQL QIKDLSQSKL GGESSSEPFR FVEGYGHYMS HQEMQGEPLE EMVGKLLEVD  240
PSAAAQLLEN KGLFLMPMDF AEGSC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G30980.18e-25bHLH family protein