PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022155506.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

G2-like

Protein Properties

Length: 467aa MW: 52047.9 Da PI: 6.5461

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022155506.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	88.6	5.9e-28	223	276	2	56
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 +++WtpeLH++Fv+aveqL G ++A+P++ilelmkv+gLt+++v+SHLQkYR++ XP_022155506.1 223 LKVDWTPELHRKFVQAVEQL-GVNQAIPSRILELMKVEGLTRHNVASHLQKYRMH 276 5899**************.9*****************************96 PP
2	Myb_DNA-binding	43.9	5.3e-14	225	274	2	48
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT+e++ ++v+av+qlG + +++I + m +g+t+ ++ s++qky+ XP_022155506.1 225 VDWTPELHRKFVQAVEQLGVNqaIPSRILELMKvEGLTRHNVASHLQKYR 274 57***********************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 467 aa Download sequence
MISSIHCLST MMKCIALGAI EFLQKPLSED KLRNIWQHVV HKAFNAGASA IPSSLKPIKE 60 SVASMLHLEL ENSKNDNQVP KELEIFNGDD IDDRELLEGS DKYPAPSTPQ QKHGMRLVDD 120 GDCQDQMNCS LEKECGEQDG ESSKSVETTC INTLGEGTSQ VENSQLPVNE AVKEEENSAD 180 GCRAASNIDH ELHDRDRISS SDKNKSKSGL GNLCGTKGSR KKLKVDWTPE LHRKFVQAVE 240 QLGVNQAIPS RILELMKVEG LTRHNVASHL QKYRMHKRHI LPKDEDGSWS HSKDPMRKNY 300 YPQRPVMAFP PSYHSNHPIP VAPVYPSWGH MACPPPGIQM WIPPGYPPWQ PPEIWPWKSY 360 PGMHADTWGC PVTPSSHSLL SSHPQQHIPR FENADAFDKS YGIALSPIDL QLADEEIDKV 420 VKEAISKPWL PLPLGLKPPS TESVLSELSR QGISTVPSHI NGSKPIQ

Sequence ? help Back to Top

Protein Sequence Length: 467 aa Download sequence

MISSIHCLST MMKCIALGAI EFLQKPLSED KLRNIWQHVV HKAFNAGASA IPSSLKPIKE  60
SVASMLHLEL ENSKNDNQVP KELEIFNGDD IDDRELLEGS DKYPAPSTPQ QKHGMRLVDD  120
GDCQDQMNCS LEKECGEQDG ESSKSVETTC INTLGEGTSQ VENSQLPVNE AVKEEENSAD  180
GCRAASNIDH ELHDRDRISS SDKNKSKSGL GNLCGTKGSR KKLKVDWTPE LHRKFVQAVE  240
QLGVNQAIPS RILELMKVEG LTRHNVASHL QKYRMHKRHI LPKDEDGSWS HSKDPMRKNY  300
YPQRPVMAFP PSYHSNHPIP VAPVYPSWGH MACPPPGIQM WIPPGYPPWQ PPEIWPWKSY  360
PGMHADTWGC PVTPSSHSLL SSHPQQHIPR FENADAFDKS YGIALSPIDL QLADEEIDKV  420
VKEAISKPWL PLPLGLKPPS TESVLSELSR QGISTVPSHI NGSKPIQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18020.3	7e-97	ARR-B family protein