PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022155504.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family ARR-B
Protein Properties Length: 559aa    MW: 62030.3 Da    PI: 6.1565
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022155504.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like88.27.6e-28315368256
         G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                      +++WtpeLH++Fv+aveqL G ++A+P++ilelmkv+gLt+++v+SHLQkYR++
  XP_022155504.1 315 LKVDWTPELHRKFVQAVEQL-GVNQAIPSRILELMKVEGLTRHNVASHLQKYRMH 368
                     5899****************.9*******************************96 PP
2Myb_DNA-binding43.66.8e-14317366248
                      SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                        WT+e++ ++v+av+qlG +   +++I + m  +g+t+ ++ s++qky+
   XP_022155504.1 317 VDWTPELHRKFVQAVEQLGVNqaIPSRILELMKvEGLTRHNVASHLQKYR 366
                      57***********************************************7 PP
3Response_reg272.3e-10201261109
                     EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH..HHHHESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS
    Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealell..kekdpDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 
                     vl+ d + + +  ++  le+ +y +v ++ +  +al  +  k +++++ ++ +  +  dG+  +k +++++ +lp i++++    +++ +++ +G
  XP_022155504.1  20 VLLLDGDSSSAAEIKAKLEEMEY-VVVTFCNENDALSAIlsKPETFHVAIVEVATSSHDGS--FKFLEAAK-DLPTIMISSIHCLSTMMKCIALG 110
                     68888889999999999******.**************9555556***************7..66676666.9********************** PP

                     ESEEEESS--HHHHHH CS
    Response_reg  94 akdflsKpfdpeelvk 109
                     a +fl Kp ++++l++
  XP_022155504.1 111 AIEFLQKPLSEDKLRN 126
                     *************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 559 aa     Download sequence    
MVCTASDLHG WKDFPKGLRV LLLDGDSSSA AEIKAKLEEM EYVVVTFCNE NDALSAILSK  60
PETFHVAIVE VATSSHDGSF KFLEAAKDLP TIMISSIHCL STMMKCIALG AIEFLQKPLS  120
EDKLRNIWQH VVHKAFNAGA SAIPSSLKPI KESVASMLHL ELENSKNDNQ VPKELEIFNG  180
DDIDDRELLE GSDKYPAPST PQQKHGMRLV DDGDCQDQMN CSLEKECGEQ DGESSKSVET  240
TCINTLGEGT SQVENSQLPV NEAVKEEENS ADGCRAASNI DHELHDRDRI SSSDKNKSKS  300
GLGNLCGTKG SRKKLKVDWT PELHRKFVQA VEQLGVNQAI PSRILELMKV EGLTRHNVAS  360
HLQKYRMHKR HILPKDEDGS WSHSKDPMRK NYYPQRPVMA FPPSYHSNHP IPVAPVYPSW  420
GHMACPPPGI QMWIPPGYPP WQPPEIWPWK SYPGMHADTW GCPVTPSSHS LLSSHPQQHI  480
PRFENADAFD KSYGIALSPI DLQLADEEID KVVKEAISKP WLPLPLGLKP PSTESVLSEL  540
SRQGISTVPS HINGSKPIQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18020.31e-140ARR-B family protein