PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022155420.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

CAMTA

Protein Properties

Length: 962aa MW: 107215 Da PI: 6.6755

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022155420.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	172.9	4.5e-54	13	127	3	116
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqr 96 +e ++rwlk+ e++ iL+n+ek++lt+e++++p+sgsl+L+n++++r+frkDG+sw+kk+dg+tv E+he+LKvg+ evl+cyYah+e+np+fqr XP_022155420.1 13 REaQTRWLKPPEVLFILQNHEKYQLTEEAPKKPTSGSLFLFNKRVLRFFRKDGHSWRKKRDGRTVGEAHERLKVGNAEVLNCYYAHGEHNPSFQR 107 55599**************************************************************************************** PP CG-1 97 rcywlLeeelekivlvhyle 116 r++w+L+++ ++ivlvhy++ XP_022155420.1 108 RSFWMLDQSCDHIVLVHYRD 127 ****************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 962 aa Download sequence
MMNAGYDIND LYREAQTRWL KPPEVLFILQ NHEKYQLTEE APKKPTSGSL FLFNKRVLRF 60 FRKDGHSWRK KRDGRTVGEA HERLKVGNAE VLNCYYAHGE HNPSFQRRSF WMLDQSCDHI 120 VLVHYRDISE GRSGAESVPQ LSPASASTFS SYLSQNLPSE YHHTSSSPGS TEVSSDTGNY 180 TNGANGVDGQ YAISELKSSN EFEVSQALRR IEEQLSLNED SLKDIGPFYS HEEVSNSHLI 240 DHYQMSNEDQ FSVLQHSENA AHDNNYTQFE TQDANGKHHH YAMAHEFVFG SEGTQPWGDA 300 LCSSKTSDLE SPDRHSLLRN ENEKTSPSSS KGTSVENELF NWLNSRRKTS PLLGSHQTPE 360 YTSPVDTHNV TSNYHTPFLK QDHGNSFGVD TSLIVAQVQK FAIHQITPEW GYATESTKVI 420 IIGSFLCDPS ESSWACMFGD IEVPLQIVQN GVLCCETPPH LPGKVAFCIT SGNREPCSEV 480 REFEYQAKTS VCNHCQSHSG GALKSPEELL LLVRLVQMLL SYSSIQKSDK VGSEVRSNNL 540 KADDDQWSSM IESLLVGSGT PSSTIDWLLR ELLKDKFHLW LSSRLEDRHD PAGCSLSKKD 600 QGIIHMIAGL GYVWALNPIL SCGVNINFRD INGWTALHWA ARFGREKMVA ALVASGASAG 660 AVTDPSSQDP AGKTAASIAD IHGHKGLAGY LSEVALTSHL SSLTFEGEHP KGSAEVEAEM 720 TVNSISKGDL SSSEDYMPLK NTLAAVRNAA QAAAQIQSAF RAHSFRKRQQ KEAVFAACID 780 EYGVDPNDIH GLFAMSKLNF CNRRDYNAAA LSIQKKYRGW KGRKEFLSIR QKVVKIQAHV 840 RGYQVRKHYK IICWAVGILD KVVLRWRRKG AGLRGFRSEV GSIDESEDDD IIKVFRKQKV 900 EGTIGEAVSR VLSMVDSPDA RQQYHRMLEG FREAKAELDG TASTSLGDVS GMEDCNTYSK 960 FV

Sequence ? help Back to Top

Protein Sequence Length: 962 aa Download sequence

MMNAGYDIND LYREAQTRWL KPPEVLFILQ NHEKYQLTEE APKKPTSGSL FLFNKRVLRF  60
FRKDGHSWRK KRDGRTVGEA HERLKVGNAE VLNCYYAHGE HNPSFQRRSF WMLDQSCDHI  120
VLVHYRDISE GRSGAESVPQ LSPASASTFS SYLSQNLPSE YHHTSSSPGS TEVSSDTGNY  180
TNGANGVDGQ YAISELKSSN EFEVSQALRR IEEQLSLNED SLKDIGPFYS HEEVSNSHLI  240
DHYQMSNEDQ FSVLQHSENA AHDNNYTQFE TQDANGKHHH YAMAHEFVFG SEGTQPWGDA  300
LCSSKTSDLE SPDRHSLLRN ENEKTSPSSS KGTSVENELF NWLNSRRKTS PLLGSHQTPE  360
YTSPVDTHNV TSNYHTPFLK QDHGNSFGVD TSLIVAQVQK FAIHQITPEW GYATESTKVI  420
IIGSFLCDPS ESSWACMFGD IEVPLQIVQN GVLCCETPPH LPGKVAFCIT SGNREPCSEV  480
REFEYQAKTS VCNHCQSHSG GALKSPEELL LLVRLVQMLL SYSSIQKSDK VGSEVRSNNL  540
KADDDQWSSM IESLLVGSGT PSSTIDWLLR ELLKDKFHLW LSSRLEDRHD PAGCSLSKKD  600
QGIIHMIAGL GYVWALNPIL SCGVNINFRD INGWTALHWA ARFGREKMVA ALVASGASAG  660
AVTDPSSQDP AGKTAASIAD IHGHKGLAGY LSEVALTSHL SSLTFEGEHP KGSAEVEAEM  720
TVNSISKGDL SSSEDYMPLK NTLAAVRNAA QAAAQIQSAF RAHSFRKRQQ KEAVFAACID  780
EYGVDPNDIH GLFAMSKLNF CNRRDYNAAA LSIQKKYRGW KGRKEFLSIR QKVVKIQAHV  840
RGYQVRKHYK IICWAVGILD KVVLRWRRKG AGLRGFRSEV GSIDESEDDD IIKVFRKQKV  900
EGTIGEAVSR VLSMVDSPDA RQQYHRMLEG FREAKAELDG TASTSLGDVS GMEDCNTYSK  960
FV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67310.1	0.0	CAMTA family protein