PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022155415.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 241aa MW: 27678.1 Da PI: 10.3514 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 78.7 | 4.2e-25 | 48 | 97 | 1 | 50 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 krie++ nr+vtf+kRr g++KKA ELSvLCd+e ++if ++g+lye++ XP_022155415.1 48 KRIEDSCNRHVTFCKRRSGLIKKARELSVLCDVELGLLIFTNRGRLYEFC 97 79***********************************************8 PP | |||||||
2 | K-box | 16.9 | 2.6e-07 | 129 | 186 | 9 | 69 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskK 69 +++++++s q+ l L k ++++q ++ d ++L++ e++qLe+qLe l ki+ ++ XP_022155415.1 129 ASDQDHQSNQTILVSLGKLLQTIQ---SQVEEPDFKKLNVTEMMQLENQLEATLDKIKIQR 186 455555555555555555555555...568889************************8655 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 241 aa Download sequence |
MVIRLWKQKQ GEKKKSGLRL DGDKRRVEGK GIRVDSGAKM GRKKIEVKRI EDSCNRHVTF 60 CKRRSGLIKK ARELSVLCDV ELGLLIFTNR GRLYEFCRGN SLLNIIERYQ SHLKGKSQSQ 120 SPIDIDTNAS DQDHQSNQTI LVSLGKLLQT IQSQVEEPDF KKLNVTEMMQ LENQLEATLD 180 KIKIQRLYLA MSILLRKVEP KLHLGDQPPL EQRECWSGQS ASLSHLLHNA ALHILCQRRT 240 N |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G03710.3 | 2e-33 | MIKC_MADS family protein |