PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_022155250.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 246aa MW: 26986.2 Da PI: 5.8327 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 39.7 | 8.6e-13 | 182 | 227 | 6 | 55 |
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++Er RR +i +++ +L+e++P+ +k + a++Le+AveY+k Lq XP_022155250.1 182 SIAERVRRTKISDRIRKLQEVVPNM----DKQTNTADMLEEAVEYVKFLQ 227 689*********************7....688*****************9 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 246 aa Download sequence |
MQSTTGGGTT SSGGGDLGPR ASGLARFRSA PATWLEALLE DDEEDPLKPN QCLTQLLAGN 60 SPALGSPPDQ GLFDANPNPN PSPAFARQNS SPAEFLGEGF YSAYGVTSAK YELPSPGLDI 120 SPTSKRGREV EAQNFHSKFS SQLKREESGV SSLLDMEMEK LLEDSVPCRV RAKRGCATHP 180 RSIAERVRRT KISDRIRKLQ EVVPNMDKQT NTADMLEEAV EYVKFLQRQI QELTEHQRGC 240 KCMVKE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G35460.1 | 2e-76 | bHLH family protein |