PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022154726.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | NAC | ||||||||
Protein Properties | Length: 469aa MW: 52335.2 Da PI: 7.3928 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 114.9 | 8.3e-36 | 51 | 197 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkklelee..........vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra....... 77 lp+G++F+Ptd+el+ e+L++kvegk+ e ++ +i+ +i++++P++Lp v+ + + +fF++ +k+y+tg+rk+r+ XP_022154726.1 51 LPAGVKFDPTDQELI-EHLEAKVEGKEDEKNKshplidefipTIQGEdGICYTHPEKLP-GVTRDGLSRHFFHRPSKAYTTGTRKRRKiqtecdf 143 799************.99*********4443345566665554777647**********.555666799******************74555555 PP NAM 78 ..tksgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 + +W++tgk+++v++ +g+++g+kk+Lv+y g+++k+ekt+Wvmh+y+l XP_022154726.1 144 ggGGETRWHKTGKTRPVMV-NGRQKGCKKILVLYtnFGKNRKPEKTNWVMHQYHL 197 4433778************.999***********5547999999*********98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 469 aa Download sequence |
MSMKSNLGGS TASVTSSDLI DAKLEEHRKC GSKQCPGCGH KLEAKPDWLG LPAGVKFDPT 60 DQELIEHLEA KVEGKEDEKN KSHPLIDEFI PTIQGEDGIC YTHPEKLPGV TRDGLSRHFF 120 HRPSKAYTTG TRKRRKIQTE CDFGGGGETR WHKTGKTRPV MVNGRQKGCK KILVLYTNFG 180 KNRKPEKTNW VMHQYHLGQH EEEKEGELVV SKIFYQTQPR QCNWSSEKAA GAGAGEATTT 240 DINVVLSSRR ESGSGSCSSS REMPTHRDEM SPVAGGGGGG GLCPPPHISN YGGLEHIHQF 300 KADHFSFAPF RRSFDEVGIG EASTARATTP NEEIGDHHHH HRHLQRQHQH HPMATTAFQV 360 TRPSNPISTI ICPPPLHHSS IILDHDSYRV SPLMLQNESF QQHQQQQEQQ QQHHHKIGGR 420 SASGLEELIM GCTSSNIKEE SSMGNNPQEA AEWMKYSPFW PDPDNPNHH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G29230.1 | 1e-135 | NAC family protein |