PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022154725.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

NAC

Protein Properties

Length: 469aa MW: 52335.2 Da PI: 7.3928

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022154725.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	114.9	8.3e-36	51	197	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkklelee..........vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra....... 77 lp+G++F+Ptd+el+ e+L++kvegk+ e ++ +i+ +i++++P++Lp v+ + + +fF++ +k+y+tg+rk+r+ XP_022154725.1 51 LPAGVKFDPTDQELI-EHLEAKVEGKEDEKNKshplidefipTIQGEdGICYTHPEKLP-GVTRDGLSRHFFHRPSKAYTTGTRKRRKiqtecdf 143 799**********.99*****4443345566665554777647******.555666799**************74555555 PP NAM 78 ..tksgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 + +W++tgk+++v++ +g+++g+kk+Lv+y g+++k+ekt+Wvmh+y+l XP_022154725.1 144 ggGGETRWHKTGKTRPVMV-NGRQKGCKKILVLYtnFGKNRKPEKTNWVMHQYHL 197 4433778********.999*******5547999999*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 469 aa Download sequence
MSMKSNLGGS TASVTSSDLI DAKLEEHRKC GSKQCPGCGH KLEAKPDWLG LPAGVKFDPT 60 DQELIEHLEA KVEGKEDEKN KSHPLIDEFI PTIQGEDGIC YTHPEKLPGV TRDGLSRHFF 120 HRPSKAYTTG TRKRRKIQTE CDFGGGGETR WHKTGKTRPV MVNGRQKGCK KILVLYTNFG 180 KNRKPEKTNW VMHQYHLGQH EEEKEGELVV SKIFYQTQPR QCNWSSEKAA GAGAGEATTT 240 DINVVLSSRR ESGSGSCSSS REMPTHRDEM SPVAGGGGGG GLCPPPHISN YGGLEHIHQF 300 KADHFSFAPF RRSFDEVGIG EASTARATTP NEEIGDHHHH HRHLQRQHQH HPMATTAFQV 360 TRPSNPISTI ICPPPLHHSS IILDHDSYRV SPLMLQNESF QQHQQQQEQQ QQHHHKIGGR 420 SASGLEELIM GCTSSNIKEE SSMGNNPQEA AEWMKYSPFW PDPDNPNHH

Sequence ? help Back to Top

Protein Sequence Length: 469 aa Download sequence

MSMKSNLGGS TASVTSSDLI DAKLEEHRKC GSKQCPGCGH KLEAKPDWLG LPAGVKFDPT  60
DQELIEHLEA KVEGKEDEKN KSHPLIDEFI PTIQGEDGIC YTHPEKLPGV TRDGLSRHFF  120
HRPSKAYTTG TRKRRKIQTE CDFGGGGETR WHKTGKTRPV MVNGRQKGCK KILVLYTNFG  180
KNRKPEKTNW VMHQYHLGQH EEEKEGELVV SKIFYQTQPR QCNWSSEKAA GAGAGEATTT  240
DINVVLSSRR ESGSGSCSSS REMPTHRDEM SPVAGGGGGG GLCPPPHISN YGGLEHIHQF  300
KADHFSFAPF RRSFDEVGIG EASTARATTP NEEIGDHHHH HRHLQRQHQH HPMATTAFQV  360
TRPSNPISTI ICPPPLHHSS IILDHDSYRV SPLMLQNESF QQHQQQQEQQ QQHHHKIGGR  420
SASGLEELIM GCTSSNIKEE SSMGNNPQEA AEWMKYSPFW PDPDNPNHH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29230.1	1e-135	NAC family protein