PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022154687.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

GRF

Protein Properties

Length: 367aa MW: 41726 Da PI: 7.7295

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022154687.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	77.9	1e-24	77	120	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCs+++++++k+CErH+hrg++rsrk++e XP_022154687.1 77 DPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVE 120 79***************************************987 PP
2	QLQ	57.7	3.4e-20	9	43	2	36
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36 +FTaaQ+q+L++Q+l++Ky++++ PvPp+Ll i+ XP_022154687.1 9 PFTAAQWQELEHQALIFKYMVSGIPVPPDLLYTIK 43 8*****************************97765 PP

Sequence ? help Back to Top
Protein Sequence Length: 367 aa Download sequence
MSGRSSRFPF TAAQWQELEH QALIFKYMVS GIPVPPDLLY TIKRSSLDSP FISRLFPQHY 60 PDVGWNYLQM GSGRKIDPEP GRCRRTDGKK WRCSKEAYPD SKYCERHMHR GKNRSRKPVE 120 VLKTTTTTTP TTPATALNSN PSTPAISSIT QNSALSSLPS DPHNHNHSCF NTHSPHPFLY 180 QHGSSSSRPP GSALHQNSNT SMLFDNPDYR YVYGLKEDGD EHPFLSEEHS GNMRGFSASS 240 LEDSWQLTPL TMSCSSSSSR HKNCSALQGD YSSYLQLQSF GDSPKQLKQE EHYYEMQNKM 300 GREEPQKIMH HFFDEWSPKD RESWLDLDDK SSNTGSVSAT RLSMSISNNS LQHDFSSIFN 360 SNKHNEN

Sequence ? help Back to Top

Protein Sequence Length: 367 aa Download sequence

MSGRSSRFPF TAAQWQELEH QALIFKYMVS GIPVPPDLLY TIKRSSLDSP FISRLFPQHY  60
PDVGWNYLQM GSGRKIDPEP GRCRRTDGKK WRCSKEAYPD SKYCERHMHR GKNRSRKPVE  120
VLKTTTTTTP TTPATALNSN PSTPAISSIT QNSALSSLPS DPHNHNHSCF NTHSPHPFLY  180
QHGSSSSRPP GSALHQNSNT SMLFDNPDYR YVYGLKEDGD EHPFLSEEHS GNMRGFSASS  240
LEDSWQLTPL TMSCSSSSSR HKNCSALQGD YSSYLQLQSF GDSPKQLKQE EHYYEMQNKM  300
GREEPQKIMH HFFDEWSPKD RESWLDLDDK SSNTGSVSAT RLSMSISNNS LQHDFSSIFN  360
SNKHNEN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	1e-54	GRF family protein