PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022154584.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family C3H
Protein Properties Length: 357aa    MW: 39172.1 Da    PI: 9.604
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022154584.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH31.82.5e-10193219127
                     --S---SGGGGTS--TTTTT-SS-SSS CS
         zf-CCCH   1 yktelCrffartGtCkyGdrCkFaHgp 27 
                     y+t +Cr +  +G C+yG +C+FaHg+
  XP_022154584.1 193 YRTDICRSWEDSGSCRYGHKCQFAHGK 219
                     89***********************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 357 aa     Download sequence    
MEGRQGKRSS KTSIIKGLNV TVPPINIQMD NHLVIGGTGH YHQETNCKSP TMLDRYSEKL  60
DRSTSIVRYF RSRSPVIGKL PSVGDTFSTP VPDVINANYR SAIMNHYASS TSRSSSFGSR  120
GGGSSLSPLS AIENLETPTA RSPQIYGTPV KVDEEVIVMD GILISSVPGG AKTMRSASES  180
VTGGGSLSGK NLYRTDICRS WEDSGSCRYG HKCQFAHGKE ELRPARLPVK NKPKVSDSYC  240
TTYGHSKFCD SHALAVTTSH SYVIDTINNS EVSRSEGGKT MSIRHMNTKP SLISTISIVD  300
WSPEDDGIKI VLPNSKSTKR EDVNQYIHEV LYGSTNERTK KRLPVFTQLC SEKLQQK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66810.11e-08C3H family protein